Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq152305 129 7e-25
seq152124 105 8e-18
seq7 86.0 7e-12
>seq152305
Length=463424
Score = 129 bits (142), Expect = 7e-25
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|||||||||| || |||| ||| || || || | ||||| ||||| ||||| ||||||
Sbjct 101676 AGGCCCGTGATATGTGCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAAGGGC 101735
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| || || |||||||| || || | ||||||||||||||| |||||||| || | |
Sbjct 101736 ACTCCGAGGCCCATGTCTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATTCAAC 101795
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|| ||||||||||| || ||||| || ||||| |||||
Sbjct 101796 ACATAGAACTGGCAGAGAGCATGGCAAGGGGGCAGAGCCAT 101836
>seq152124
Length=6934412
Score = 105 bits (116), Expect = 8e-18
Identities = 450/698 (64%), Gaps = 21/698 (3%)
Strand=Plus/Plus
Query 9454 CTAGCAGCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGC 9513
|| ||| | ||| | | ||| | ||||| || |||||| | | ||| || |||||
Sbjct 3899690 CTGGCAACCCAGTTACTGCCCCCGCTGTACTCCCTGGTGTTTATAGTGGGGCTGGTGGGC 3899749
Query 9514 AATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATG 9573
|| || | || | | | || |||| | ||||| || | ||| || | | || |||||
Sbjct 3899750 AACGTCGTGGTAGCGCTGATCCTCATTAAATACAAGAGGCTCAGAATCGTGACCAACATC 3899809
Query 9574 TTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATG 9633
| || | |||||||| | ||||| ||||| || ||||| || | |||||||||||
Sbjct 3899810 TACCTCCTCAACTTGGCGTTTTCTGATTTGCTTTTCCTTTTCACCCTTCCATTTTGGATT 3899869
Query 9634 CACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGG 9693
||| | || | || | || ||| || || | |||| |||| ||| | |
Sbjct 3899870 CAC---ACTGAAGTGAAAAGCGAGTGGGTCTTCGGAAATTCCATGTGCAAATTTGTTTCC 3899926
Query 9694 GGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGAC 9753
|| | | ||||||| || |||||| || |||| | ||| |||| | || || ||
Sbjct 3899927 GGGCTCTATTACATGGGCCTCTACAGCGAGATCTTCTTCATAGTCCTCTTGACGGTCGAT 3899986
Query 9754 AGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGC 9813
|||| || || | ||| | || || ||||| | || || || | || ||||
Sbjct 3899987 CGGTACCTGGCCATCGTCCACGCCGTGTTCGCTTTACAAGTCAGGACGGTCAACTTTGGC 3900046
Query 9814 ATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTC 9873
|| | || ||| |||||| ||||||||||| | |||||||| |||| ||
Sbjct 3900047 ATCATGACAAGTGCCGTCACCTGGGGATTGGCAGGGTTGGCGGCCCTCCCTTCATTTGTC 3900106
Query 9874 TTTCATGGACA-CCAAGATGACAATGGTAGGGTTCAGTGTG-ATCC---TTACTACCCAG 9928
|||| | ||| | ||| | | | || | || || | || || |||||
Sbjct 3900107 -TTCA-GCACATCTCAGAGAAGCCTCG-AGAATCACGTATGCAGCCCGGTT--TACCC-- 3900159
Query 9929 AGATGTCTA--CAAATGTTTGGAGGCGCGCCC--ACGTTGCAAAGGTGATTATGTTAAGT 9984
|||| | | || | |||| || | || || || ||| ||| | || |
Sbjct 3900160 CGATGCCAAAGCAGAGAACTGGAAGCACTTCCGAACCCTGAAAA--TGAACCTCTTGGGA 3900217
Query 9985 CTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTG 10044
|| ||||| ||| || || |||||| |||||| || | |||||||| || ||| ||
Sbjct 3900218 CTTATTTTTCCTATGATCGTTATGGTTGTCTGTTATGCGGGAATTATCAAAAAGCTGCTG 3900277
Query 10045 AGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCC 10104
| ||| | |||| ||||| ||||| || |||| || ||||| || ||| | | |
Sbjct 3900278 AAATGCCGGAATGAGAAAAAGTATAAGGCAGTCCGGCTGATTTTTGTAATAATGATAGTC 3900337
Query 10105 TATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCT 10142
| ||| |||| ||||| ||||| ||| ||||||| ||
Sbjct 3900338 TTCTTTCTTTTCTGGACCCCCTATAACCTTGTTCTTCT 3900375
Score = 105 bits (116), Expect = 8e-18
Identities = 450/698 (64%), Gaps = 21/698 (3%)
Strand=Plus/Plus
Query 176340 CTAGCAGCTCAGGTGGTACCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGC 176399
|| ||| | ||| | | ||| | ||||| || |||||| | | ||| || |||||
Sbjct 3899690 CTGGCAACCCAGTTACTGCCCCCGCTGTACTCCCTGGTGTTTATAGTGGGGCTGGTGGGC 3899749
Query 176400 AATATCTTAGTGGTGATTATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATG 176459
|| || | || | | | || |||| | ||||| || | ||| || | | || |||||
Sbjct 3899750 AACGTCGTGGTAGCGCTGATCCTCATTAAATACAAGAGGCTCAGAATCGTGACCAACATC 3899809
Query 176460 TTACTGTTAAACTTGGCAATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATG 176519
| || | |||||||| | ||||| ||||| || ||||| || | |||||||||||
Sbjct 3899810 TACCTCCTCAACTTGGCGTTTTCTGATTTGCTTTTCCTTTTCACCCTTCCATTTTGGATT 3899869
Query 176520 CACTATATTGGAATGTATCATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGG 176579
||| | || | || | || ||| || || | |||| |||| ||| | |
Sbjct 3899870 CAC---ACTGAAGTGAAAAGCGAGTGGGTCTTCGGAAATTCCATGTGCAAATTTGTTTCC 3899926
Query 176580 GGTGTGTGTTACATGTCACTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGAC 176639
|| | | ||||||| || |||||| || |||| | ||| |||| | || || ||
Sbjct 3899927 GGGCTCTATTACATGGGCCTCTACAGCGAGATCTTCTTCATAGTCCTCTTGACGGTCGAT 3899986
Query 176640 AGGTATCTAGCTGTTGTCTATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGC 176699
|||| || || | ||| | || || ||||| | || || || | || ||||
Sbjct 3899987 CGGTACCTGGCCATCGTCCACGCCGTGTTCGCTTTACAAGTCAGGACGGTCAACTTTGGC 3900046
Query 176700 ATAGTTACCTGTGTATGTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTC 176759
|| | || ||| |||||| ||||||||||| | |||||||| |||| ||
Sbjct 3900047 ATCATGACAAGTGCCGTCACCTGGGGATTGGCAGGGTTGGCGGCCCTCCCTTCATTTGTC 3900106
Query 176760 TTTCATGGACA-CCAAGATGACAATGGTAGGGTTCAGTGTG-ATCC---TTACTACCCAG 176814
|||| | ||| | ||| | | | || | || || | || || |||||
Sbjct 3900107 -TTCA-GCACATCTCAGAGAAGCCTCG-AGAATCACGTATGCAGCCCGGTT--TACCC-- 3900159
Query 176815 AGATGTCTA--CAAATGTTTGGAGGCGCGCCC--ACGTTGCAAAGGTGATTATGTTAAGT 176870
|||| | | || | |||| || | || || || ||| ||| | || |
Sbjct 3900160 CGATGCCAAAGCAGAGAACTGGAAGCACTTCCGAACCCTGAAAA--TGAACCTCTTGGGA 3900217
Query 176871 CTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTG 176930
|| ||||| ||| || || |||||| |||||| || | |||||||| || ||| ||
Sbjct 3900218 CTTATTTTTCCTATGATCGTTATGGTTGTCTGTTATGCGGGAATTATCAAAAAGCTGCTG 3900277
Query 176931 AGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCC 176990
| ||| | |||| ||||| ||||| || |||| || ||||| || ||| | | |
Sbjct 3900278 AAATGCCGGAATGAGAAAAAGTATAAGGCAGTCCGGCTGATTTTTGTAATAATGATAGTC 3900337
Query 176991 TATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCT 177028
| ||| |||| ||||| ||||| ||| ||||||| ||
Sbjct 3900338 TTCTTTCTTTTCTGGACCCCCTATAACCTTGTTCTTCT 3900375
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 176358 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417
||| | |||||| || |||||| | | || || |||||||| || | || ||| |
Sbjct 3878463 CCCCCACTGTATTCCCTGGTGTTTATAGTGGGTGTGGTGGGCAATTTCATGGTCGTGCTG 3878404
Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477
|| || | | ||||| || | ||| || | | || ||||| | || | | ||||||
Sbjct 3878403 ATCCTCGTTAAATACAAGAGGCTCATAACCATGACCAACATCTACCTCCTCAGCTTGGCG 3878344
Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACT 176523
| ||||| ||||| |||||||| || || ||||||||||| ||||
Sbjct 3878343 TTTTCTGATTTGCTTTTTCTTTTCACCTTTCCATTTTGGATTCACT 3878298
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 9472 CCCGCCCTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531
||| | |||||| || |||||| | | || || |||||||| || | || ||| |
Sbjct 3878463 CCCCCACTGTATTCCCTGGTGTTTATAGTGGGTGTGGTGGGCAATTTCATGGTCGTGCTG 3878404
Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591
|| || | | ||||| || | ||| || | | || ||||| | || | | ||||||
Sbjct 3878403 ATCCTCGTTAAATACAAGAGGCTCATAACCATGACCAACATCTACCTCCTCAGCTTGGCG 3878344
Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACT 9637
| ||||| ||||| |||||||| || || ||||||||||| ||||
Sbjct 3878343 TTTTCTGATTTGCTTTTTCTTTTCACCTTTCCATTTTGGATTCACT 3878298
>seq7
Length=40039088
Score = 86.0 bits (94), Expect = 7e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 138169 GCCTGGGGCATCACCTCCTCCAGGTAAAACTGGATCATCTCAGACAGGGCCTGGCAGCCC 138228
|||| |||||||||||||||||| |||||| ||||||| || ||| |||||||||||||
Sbjct 38153992 GCCTTGGGCATCACCTCCTCCAGATAAAACCGGATCATATCCAACATGGCCTGGCAGCCC 38153933
Query 138229 AGGTA 138233
|||||
Sbjct 38153932 AGGTA 38153928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588600472102160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |