Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq152076 105 6e-18
seq152203 102 7e-17
seq171586 100 2e-16
>seq152076
Length=2538501
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 778111 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778170
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| |||||||| |||||||||||||| ||||| ||
Sbjct 778171 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTC 778230
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 778231 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 778290
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 778291 TTCACGAAGATCTGCATG 778308
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 778795 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778854
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| |||||||| |||||||||||||| ||||| ||
Sbjct 778855 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 778914
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 778915 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 778974
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 778975 TTCACGAAGATCTGCATG 778992
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 778339 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778398
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| |||||||| |||||||||||||| ||||| ||
Sbjct 778399 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTC 778458
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 778459 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 778518
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 778519 TTCACGAAGATCTGCATG 778536
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 778567 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778626
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| ||||| || |||||||| ||||| ||||| ||
Sbjct 778627 GCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTC 778686
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 778687 ACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 778746
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 778747 TTCACGAAGATCTGCATG 778764
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | ||||| ||| || ||||| || ||
Sbjct 779023 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 779082
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 779083 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 779142
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 779143 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 779202
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 779203 TTCACAAAAATCTGCAT 779219
>seq152203
Length=2432022
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | ||||| || || || || ||||| || | |||||| ||| ||
Sbjct 2338278 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2338337
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| || |||| | | ||||||||| || || ||||| || |||||
Sbjct 2338338 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2338397
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | |||||| || ||| ||||||| ||| | |||||
Sbjct 2338398 ATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTTA 2338457
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| ||||| ||||||||||||||
Sbjct 2338458 CCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
>seq171586
Length=8203
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 2002 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2061
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| |||||||| |||||||||||||| ||||| ||
Sbjct 2062 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 2121
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 2122 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 2181
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 2182 TTCACGAAGATCTGCATG 2199
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 2230 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2289
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| |||||||| |||||||||||||| ||||| ||
Sbjct 2290 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 2349
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 2350 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2409
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 2410 TTCACGAAGATCTGCATG 2427
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 2686 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 2745
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 2746 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 2805
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 2806 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2865
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 2866 TTCACAAAAATCTGCAT 2882
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | ||||| ||| || ||||| || ||
Sbjct 1774 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 1833
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || | |||||| || || || |||||||||||||| ||||| ||
Sbjct 1834 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 1893
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||||| || ||| ||||| | ||| | || ||||| ||||| ||
Sbjct 1894 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 1953
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 1954 TTCACGAAGATCTGCATG 1971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432772124154568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |