Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq152076 105 6e-18 seq152203 102 7e-17 seq171586 100 2e-16 >seq152076 Length=2538501 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||| | ||||| ||| || ||||| || || Sbjct 778111 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778170 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| |||||||| |||||||||||||| ||||| || Sbjct 778171 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTC 778230 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 778231 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 778290 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 778291 TTCACGAAGATCTGCATG 778308 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||| | ||||| ||| || ||||| || || Sbjct 778795 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778854 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| |||||||| |||||||||||||| ||||| || Sbjct 778855 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 778914 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 778915 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 778974 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 778975 TTCACGAAGATCTGCATG 778992 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | ||||| ||| || ||||| || || Sbjct 778339 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778398 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| |||||||| |||||||||||||| ||||| || Sbjct 778399 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTC 778458 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 778459 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 778518 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 778519 TTCACGAAGATCTGCATG 778536 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||| | ||||| ||| || ||||| || || Sbjct 778567 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778626 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| ||||| || |||||||| ||||| ||||| || Sbjct 778627 GCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTC 778686 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 778687 ACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 778746 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 778747 TTCACGAAGATCTGCATG 778764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | ||||| ||| || ||||| || || Sbjct 779023 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 779082 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || ||||| ||||| |||||||| ||||| || Sbjct 779083 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 779142 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 779143 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 779202 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 779203 TTCACAAAAATCTGCAT 779219 >seq152203 Length=2432022 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| || || || || ||||| || | |||||| ||| || Sbjct 2338278 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2338337 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| || |||| | | ||||||||| || || ||||| || ||||| Sbjct 2338338 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2338397 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| || ||| ||||||| ||| | ||||| Sbjct 2338398 ATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTTA 2338457 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||||| |||||||||||||| Sbjct 2338458 CCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486 >seq171586 Length=8203 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | ||||| ||| || ||||| || || Sbjct 2002 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2061 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| |||||||| |||||||||||||| ||||| || Sbjct 2062 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 2121 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 2122 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 2181 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 2182 TTCACGAAGATCTGCATG 2199 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | ||||| ||| || ||||| || || Sbjct 2230 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2289 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| |||||||| |||||||||||||| ||||| || Sbjct 2290 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 2349 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 2350 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2409 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 2410 TTCACGAAGATCTGCATG 2427 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | ||||| ||| || ||||| || || Sbjct 2686 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 2745 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || ||||| ||||| |||||||| ||||| || Sbjct 2746 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 2805 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 2806 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2865 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||||||||| Sbjct 2866 TTCACAAAAATCTGCAT 2882 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| ||| | ||||| ||| || ||||| || || Sbjct 1774 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 1833 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | |||||| || || || |||||||||||||| ||||| || Sbjct 1834 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 1893 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||||| || ||| ||||| | ||| | || ||||| ||||| || Sbjct 1894 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 1953 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 1954 TTCACGAAGATCTGCATG 1971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432772124154568