Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq152076 105 4e-18 seq171586 102 5e-17 >seq152076 Length=2538501 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| |||||||||||||| Sbjct 778537 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 778596 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || |||| |||||||||| ||| Sbjct 778597 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGG 778656 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||| ||||| || ||||| ||| | || | || | || | | || | Sbjct 778657 ATGCCCTCTTTGTC--CTGGATTTTGGCCTTCACATTCTCAATTGTGTCACTGGGCTCTA 778714 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 778715 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778763 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| |||||||||||||| Sbjct 778765 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 778824 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || |||| |||||||||| || Sbjct 778825 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 778884 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||||| ||| | | | || | || | | || | Sbjct 778885 ATGCCCTCCTTGTC--CTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTA 778942 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 778943 CCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 778991 >seq171586 Length=8203 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| |||||||||||||| Sbjct 1744 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1803 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || |||| ||||||||| ||| Sbjct 1804 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 1863 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||||| ||| | | | || | || | | || | Sbjct 1864 ATGCCCTCCTTGTC--CTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTA 1921 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 1922 CCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 1970 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| |||||||||||||| Sbjct 1972 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2031 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || |||| |||||||||| || Sbjct 2032 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 2091 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||||| ||| | | | || | || | | || | Sbjct 2092 ATGCCCTCCTTGTC--CTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTA 2149 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 2150 CCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 2198 Score = 102 bits (112), Expect = 5e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| |||||||||||||| Sbjct 2200 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2259 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || |||| |||||||||| || Sbjct 2260 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGG 2319 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||||| ||| | | | || | || | | || | Sbjct 2320 ATGCCCTCCTTGTC--CTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTA 2377 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 2378 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2426 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| ||||||||||| || Sbjct 2428 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2487 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || || |||| ||||||||| ||| Sbjct 2488 AGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 2547 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||| ||||| || ||||| ||| | || | || | || | | || | Sbjct 2548 ATGCCCTCTTTGTC--CTGGATTTTGGCCTTCACATTCTCAATTGTGTCACTGGGCTCTA 2605 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || ||||| ||||||||||| Sbjct 2606 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2654 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | ||| | ||| || ||||| | ||| || ||||| |||||||||||||| Sbjct 2656 CCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 2715 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | ||||||||| || || || |||| ||||||||| || Sbjct 2716 AGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGG 2775 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| || ||||| ||| | | | || | || | | || | Sbjct 2776 ATGCCTTCCTTGTC--CTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTA 2833 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| ||||| || || || |||||||| |||||||| Sbjct 2834 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCAT 2882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322283905634240