Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq157043 700 0.0
seq152207 113 3e-20
>seq157043
Length=30550
Score = 700 bits (776), Expect = 0.0
Identities = 842/1130 (75%), Gaps = 17/1130 (2%)
Strand=Plus/Plus
Query 107500 TGAAGCTGCCAGCAAAGAGATCC-ATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAA 107558
|||||||||| | ||| ||| |||||||||||| ||||| ||||||| ||||
Sbjct 21517 TGAAGCTGCCTCCCCAGA-ATCGGATCAACTGTTCTCAGATCATCAAAGGGGAC-AGGAG 21574
Query 107559 -GCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCAC 107617
|| ||| ||||| || | ||||||| ||||| ||| || |||||
Sbjct 21575 TGCCCTGGAGGAGGCCAGTTTACGGAGTCTGGAAGCGAAGAG-----GGTACCC-CTCAC 21628
Query 107618 TGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCG-CTTCAAGGCCCAAAGGAAGT 107676
| ||| | |||||| |||| |||| |||||| || | ||||||| | | | | |
Sbjct 21629 AGAAACCCAGTACCTCCACATGACCAAAGACTGC-AGTGACTTCAAGAACGAGCGAAGAT 21687
Query 107677 TCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGG 107736
| || |||||||| ||||| || || || |||| ||||| ||||| || ||||||
Sbjct 21688 TTATCCAGTTCCCCCTGAGCAAGGAGGAAGAGAACTTTCCCATCGCCTATTCTATGGTGA 21747
Query 107737 TCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACA 107796
|||| ||||||| || ||||||||| | || || | ||| | || ||||||||||||
Sbjct 21748 TCCACCAGAAGATCGAGAACTTTGAAAGACTCCTCAGGGCCATCTACGCCCCTCAGAACG 21807
Query 107797 TATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCA 107856
| ||||| |||||| | || | |||||| || ||| |||| || ||||| |||| ||| |
Sbjct 21808 TGTACTGCGTCCACATTGACGAGAAGTCTCCCGAGCCTTTTAAGGAGGCAGTCAGGGCGA 21867
Query 107857 TTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCT 107916
| | || |||||||| || |||||| |||||| ||| | || | ||||| || || |
Sbjct 21868 TCACCTCGTGCTTCCCGAACGTCTTCGTGGCCACTAAACTCGTAGCCGTGGTCTACGCTT 21927
Query 107917 CCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGC 107976
|||||||| |||||||||| || || ||||| ||||||||| |||||| ||| | ||||
Sbjct 21928 CCTGGTCCCGAGTGCAAGCGGATCTCAACTGCATGGAAGACCTGCTCCGGAGTCCGGTGC 21987
Query 107977 CATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGA 108036
| ||||||||| | | || || |||||||| ||||||||||| |||||||| || ||||
Sbjct 21988 CTTGGAAGTACCTCTTAAACACCTGCGGGACGGACTTCCCCATCAAGACCAACGCTGAGA 22047
Query 108037 TGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTG 108096
|||| | | | || || | |||| || |||||||| |||||||| ||||| || || |
Sbjct 22048 TGGTGCGGTCTCTGAAAGTTCTGAACGGGAAGAACAGCATGGAGTCGGAGGTGCCCTCGG 22107
Query 108097 AGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGAC--AGA-CACACTGTACCCTA 108153
| ||||| | || |||||| ||||||| |||| | ||| ||| |||| || |
Sbjct 22108 CCTACAAAAGGAGCCGGTGGAAACACCGCTACATGGTGGCGAAGAACACGCTGTTCCAGA 22167
Query 108154 CCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213
| | | ||||| ||| || || || || | ||||||||||| || || |||||||
Sbjct 22168 TGAAGATGGAGAAGGGCCCCCCACCCGACAACGTGCCCATGTTCACCGGAAACGCCTATT 22227
Query 108214 TTGTGGCCT-CTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTG 108272
| ||||||| | ||| ||| ||||| ||| |||| || ||||| ||| || ||||
Sbjct 22228 TCGTGGCCTGCAGGAG-CTTCGTCCAGCATCTCTTCGAGAACCCGCGGGCCCGAAAACTG 22286
Query 108273 GTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGT 108332
| || ||| ||| ||||| || ||||| ||||| ||||||||||||||||| |||||
Sbjct 22287 ATCGAGTGGACCAATGACACGTACAGCCCGGACGAGCACCTCTGGGCCACCCTGCAGCGG 22346
Query 108333 GCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACT 108392
| || |||||||| ||||| | ||| |||| ||||||| |||| ||| ||| |||
Sbjct 22347 GTGCCTTGGATGCCGGGCTCCATCCCTCACCACTCCAAGTACCACACCTCCGACCTGAAC 22406
Query 108393 GCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCT 108452
||||||||| |||| ||||||||| | |||||| ||||| ||| ||| |||||| ||
Sbjct 22407 GCCATCGCCCGGCTGGTCAAGTGGATGGGCCACGAAGGAGACGTCGGCAAGGGGGCACCC 22466
Query 108453 TATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTG 108512
|| || |||||| | |||| ||| | | ||||| ||||||| ||||||||||| |||||
Sbjct 22467 TACGCCCCCTGCACGGGAACCCACCAGCGGGCCGTCTGCATCTACGGGGCCGGAGACCTC 22526
Query 108513 TACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGAT 108572
||||||| |||||||| |||||||| |||| |||||||||||||| |||||| ||
Sbjct 22527 CACTGGATGCTCCAGAATCATCACCTGCTGGCCAACAAGTTTGACCCCCAGGTGGACGAC 22586
Query 108573 AACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGG 108622
|||| || |||||| | || || ||||| || || |||||| |||| ||
Sbjct 22587 AACGCGCTCCAGTGCCTGGAGGAATACCTGCGCCACAAGGCCGTCTACGG 22636
>seq152207
Length=3261333
Score = 113 bits (124), Expect = 3e-20
Identities = 233/343 (68%), Gaps = 4/343 (1%)
Strand=Plus/Plus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || ||||| |||||| ||| || || |||||||| || || ||||| | | ||
Sbjct 3124457 CCCCTTAGTAAGGAAGAGGCAGAGTTTCCGATTGCCTATTCCATAGTGGTTTACCATAAA 3124516
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||||| |||| || || ||| | || | || ||||| ||||| ||||| ||
Sbjct 3124517 ATTGAAATGCTTGACCGACTCCTGAGGTCCATCTACGCCCCCCAGAATTATTACTGCATC 3124576
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|| || || || || || || | || || || || |||| ||| || |||
Sbjct 3124577 CATGTTGACAAAAAATCTCCGGAATCCTTTTTAGCTGCAGTGAAGGGAATTGCATCTTGC 3124636
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| |||||||||||| || ||| | ||| || || ||||| || ||| ||||
Sbjct 3124637 TTCAACAATGTCTTCATTGCAAGTCAACTGGAGAGTGTTGTGTATGCATCGTGGAGCAGA 3124696
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985
||||| || ||||| ||||| ||| |||| | || |||| ||| | | ||||| |
Sbjct 3124697 GTGCAGGCAGACCTCAACTGCATGAAAGA-TCTCTACAGA-AAGAGTACAAACTGGAAAT 3124754
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAA 108028
| || | ||| || || | || |||||||| ||||||||
Sbjct 3124755 ATTTGATCAATCTCTGTGGCATGGATTTCCCCATGAAGACCAA 3124797
Score = 86.0 bits (94), Expect = 4e-12
Identities = 193/284 (68%), Gaps = 6/284 (2%)
Strand=Plus/Plus
Query 108276 GAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG-C 108334
|| |||| ||||| ||||| || ||||| ||| || | ||||||||| |||| | |
Sbjct 3125048 GAGTGGGCTAAAGATACCTACAGTCCCGATGAATACTTATGGGCCACCATTCAAAGAATC 3125107
Query 108335 TCCGTGGATGCCTGG-CTCTGTTCCTAGCCACCCC-AAGTATCACATCTCAGACATGACT 108392
||| | | || || | || ||| | ||| | | |||||| || | || || |||
Sbjct 3125108 CCCGAAGTTCCCGGGGCGCT-TTCTT--CCAGCACTAAGTATGACGTTTCGGATATGCAC 3125164
Query 108393 GCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCT 108452
|| |||||||| | || |||||||| ||| || |||||||| || |||||| ||
Sbjct 3125165 GCAGTCGCCAGGTTTGTGAAGTGGCATTACTTTGAAGGAGATGTTTCCAAGGGGGCTCCA 3125224
Query 108453 TATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTG 108512
||| |||| ||| || || || | || | || | | || | || ||| ||
Sbjct 3125225 TATCCACCATGCCAGGGGATTCACGTCCGCTCCGTGTGTGTGTTTGGAGTGGGAGACTTG 3125284
Query 108513 TACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGA 108556
|||||| || | ||| || ||| |||| || |||||||||||
Sbjct 3125285 AGCTGGATGCTACGGAAACACCACTTCTTTGCCAACAAGTTTGA 3125328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347419241142996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |