Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq152203 104 2e-17 seq171586 95.1 9e-15 seq152076 91.5 1e-13 >seq152203 Length=2432022 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||| || || ||||||||||| | | || | |||| Sbjct 2337591 AGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCT 2337650 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| | ||| || |||||| ||| | |||||| || || Sbjct 2337651 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCC 2337710 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| ||| | ||||||| | Sbjct 2337711 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2337770 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || ||||| || ||||| Sbjct 2337771 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||| || ||||| |||||||| | | || | |||| Sbjct 2337819 AGAACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCT 2337878 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| | ||| || |||||| ||| | |||||| || || Sbjct 2337879 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCC 2337938 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| ||| | ||||||| | Sbjct 2337939 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2337998 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || ||||| || ||||| Sbjct 2337999 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| || || || ||||| || || ||||||||||| | | || | |||| Sbjct 2337363 AGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCT 2337422 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| | ||| || |||||| ||| | |||||| || || Sbjct 2337423 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCT 2337482 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| ||| | ||||||| | Sbjct 2337483 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2337542 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || ||||| || ||||| Sbjct 2337543 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||| || || || |||||||| | | || | |||| Sbjct 2338047 AGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCT 2338106 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| | ||| || |||||| ||| | |||||| || || Sbjct 2338107 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCC 2338166 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| ||| | ||||||| | Sbjct 2338167 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2338226 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||||||| || || ||||| || ||||| Sbjct 2338227 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258 >seq171586 Length=8203 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | ||| || || || || || || ||||||||||||| | ||| || |||| Sbjct 2671 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCT 2730 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || ||||| ||| |||| || || || || || || | ||||||||| || Sbjct 2731 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 2790 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| ||||||| |||||| || | ||||||| | Sbjct 2791 TGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 2850 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||||| |||| || || |||||||| |||||||| Sbjct 2851 TTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 2885 >seq152076 Length=2538501 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || || | ||| || || || || || || ||||||||||| | | ||| || |||| Sbjct 779008 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCT 779067 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || ||||| ||| |||| || || || || || || | ||||||||| || Sbjct 779068 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 779127 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | ||| ||||||| |||||| || | ||||||| | Sbjct 779128 TGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 779187 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 ||||| |||| || || |||||||| |||||||| Sbjct 779188 TTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 779222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378418637018730