Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 104 2e-17
seq171586 95.1 9e-15
seq152076 91.5 1e-13
>seq152203
Length=2432022
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || ||||| || || ||||||||||| | | || | ||||
Sbjct 2337591 AGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCT 2337650
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| | ||| || |||||| ||| | |||||| || ||
Sbjct 2337651 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCC 2337710
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| ||| | ||||||| |
Sbjct 2337711 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2337770
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||||| || || ||||| || |||||
Sbjct 2337771 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || ||||| || ||||| |||||||| | | || | ||||
Sbjct 2337819 AGAACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCT 2337878
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| | ||| || |||||| ||| | |||||| || ||
Sbjct 2337879 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCC 2337938
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| ||| | ||||||| |
Sbjct 2337939 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2337998
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||||| || || ||||| || |||||
Sbjct 2337999 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || || || ||||| || || ||||||||||| | | || | ||||
Sbjct 2337363 AGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCT 2337422
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| | ||| || |||||| ||| | |||||| || ||
Sbjct 2337423 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCT 2337482
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| ||| | ||||||| |
Sbjct 2337483 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2337542
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||||| || || ||||| || |||||
Sbjct 2337543 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| || || ||||| || || || |||||||| | | || | ||||
Sbjct 2338047 AGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCT 2338106
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||| || || || ||| |||| | ||| || |||||| ||| | |||||| || ||
Sbjct 2338107 TCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCC 2338166
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | |||||| | ||| ||||||| |||||| ||| | ||||||| |
Sbjct 2338167 TGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTC 2338226
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||||||||||| || || ||||| || |||||
Sbjct 2338227 TTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258
>seq171586
Length=8203
Score = 95.1 bits (104), Expect = 9e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||||| | ||| || ||||
Sbjct 2671 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCT 2730
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || ||||| ||| |||| || || || || || || | ||||||||| ||
Sbjct 2731 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 2790
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|||| ||| || | ||| ||||||| |||||| || | ||||||| |
Sbjct 2791 TGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 2850
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| |||| || || |||||||| ||||||||
Sbjct 2851 TTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 2885
>seq152076
Length=2538501
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| || | ||| || || || || || || ||||||||||| | | ||| || ||||
Sbjct 779008 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCT 779067
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | || ||||| ||| |||| || || || || || || | ||||||||| ||
Sbjct 779068 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 779127
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|||| ||| || | ||| ||||||| |||||| || | ||||||| |
Sbjct 779128 TGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTC 779187
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| |||| || || |||||||| ||||||||
Sbjct 779188 TTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 779222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 378418637018730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |