Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq152282 111 1e-19
seq171586 93.3 4e-14
seq152076 91.5 1e-13
>seq152282
Length=256244
Score = 111 bits (122), Expect = 1e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 23046 CCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCG 23105
|||| || ||| || |||||||| || ||||| || || || |||||||| || || |
Sbjct 182805 CCACTTCATCTCTGCTGGTGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGG 182864
Query 23106 TGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCG 23165
| |||| || ||||||||| || ||||| || | ||||||||||||||||||||||
Sbjct 182865 TCCCCAGGTTCTGCTGGTTGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCG 182924
Query 23166 TGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204
| || ||||| ||| || || ||||| || |||||
Sbjct 182925 TTCCGGTCTCCGTCTGGGATTCTATGATGGCGTACCACA 182963
>seq171586
Length=8203
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/233 (69%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| ||||| || ||||| ||||| ||||| || |||||| | || || ||
Sbjct 2887 TCAAA-ATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAG 2829
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| | || | || || | ||| ||||||||||||| | || ||
Sbjct 2828 CCCAGTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCT 2769
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| | ||||| | || | |||
Sbjct 2768 GACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCCGAC 2709
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || || || || ||||| || || || || | |||||||| ||
Sbjct 2708 TACAACATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 2656
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 2199 CATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 2140
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||| ||| | || ||||||||
Sbjct 2139 TGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 2080
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || ||||| ||| | ||||| || | ||| || ||
Sbjct 2079 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 2020
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || || || ||||| || || || || | |||||||| ||
Sbjct 2019 CATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 1972
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 2427 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 2368
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||| ||| | || ||||||||
Sbjct 2367 TGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 2308
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || ||||| ||| | ||||| || | ||| || ||
Sbjct 2307 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 2248
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || || || ||||| || || || || | |||||||| ||
Sbjct 2247 CATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 2200
>seq152076
Length=2538501
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 778308 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778249
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||| ||| | || ||||||||
Sbjct 778248 TGACACAATTGAGAACGTGAAGGCTAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 778189
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || ||||| ||| | ||||| || | ||| || ||
Sbjct 778188 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778129
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||| || || || ||||| || || || || | |||||||| ||
Sbjct 778128 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778081
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 778992 CATGCAGATCTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778933
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||| ||| | || ||||||||
Sbjct 778932 TGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 778873
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || ||||| ||| | ||||| || | ||| || ||
Sbjct 778872 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778813
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||| || || || ||||| || || || || | |||||||| ||
Sbjct 778812 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778765
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 778536 CATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778477
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| ||||||||| ||| | || ||||||||
Sbjct 778476 TGACACAATTGAGAACGTGAAGGCTAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 778417
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || ||||| ||| | ||||| || | ||| || ||
Sbjct 778416 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778357
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || || || ||||| || || || || | |||||||| ||
Sbjct 778356 CATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778309
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| ||||| ||||| || |||||| | || || || ||
Sbjct 778764 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778705
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | || || | ||| |||||| || ||| | || ||||||||
Sbjct 778704 TGACACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAGGGCATCCCCCCCGACCA 778645
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || ||||| ||| | ||||| || | ||| || ||
Sbjct 778644 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778585
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||| || || || ||||| || || || || | |||||||| ||
Sbjct 778584 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778537
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/233 (69%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| ||||| || ||||| ||||| ||||| || |||||| | || || ||
Sbjct 779224 TCAAA-ATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAG 779166
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| | || | || || | ||| ||||||||||||| | || ||
Sbjct 779165 CCCAGTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCT 779106
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| | ||||| | || | ||
Sbjct 779105 GACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCTGAC 779046
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| ||||| || || || || ||||| || || || || | |||||||| ||
Sbjct 779045 TACAACATCCAGAAGGAGTCCACTCTGCACCTTGTCCTACGCCTGAGGGGTGG 778993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444651125899680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |