Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=47594283 Score = 98.7 bits (108), Expect = 2e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| || || || |||||||||||| |||| | || |||||||| |||| Sbjct 29602075 TTGTAGCCTTTGCAGCGGTAGAGGGAATCTTCTTTTCTGGTTCTTTTGCATCCATATTCT 29602016 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| || || | ||||||| ||||| | |||||||| |||| ||| | Sbjct 29602015 GGCTCAAGAAAAGAGGGTTAATGCCTGGGCTCACTTTTTCCAATGAACTCATCAGTAGAG 29601956 Query 102036 ACGA 102039 |||| Sbjct 29601955 ACGA 29601952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987046238427070