Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 105 7e-18
>seq152203
Length=2432022
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| ||| ||||| | ||||| || || ||||| || || || | |||| |
Sbjct 2337816 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCA 2337875
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| |||||| | |||||||| || || ||||||||||||
Sbjct 2337876 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2337935
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||| |||||||||| || | ||| |
Sbjct 2337936 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 2337995
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||||||||||| || || || || || ||||||
Sbjct 2337996 GTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 2338031
Score = 102 bits (112), Expect = 8e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| ||| ||||| | ||||| || || || || || || || | |||| |
Sbjct 2338044 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCA 2338103
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| |||||| | |||||||| || || ||||||||||||
Sbjct 2338104 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2338163
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||| |||||||||| || | ||| |
Sbjct 2338164 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 2338223
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||||||||||| || || || || || ||||||
Sbjct 2338224 GTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 2338259
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
|| |||| || || || | ||||| || || || ||||| || || | |||| |
Sbjct 2337357 AAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGC 2337416
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||||| ||||| || || ||| |||||| | |||||||| || || |||||||||
Sbjct 2337417 CCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCT 2337476
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | ||||| |||||||||| || | |||
Sbjct 2337477 TTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTG 2337536
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
| |||||||||||||| || || || || || ||||||
Sbjct 2337537 ATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 2337575
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || ||||| | || || || || || ||||| || || | |||| |
Sbjct 2337588 CGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCA 2337647
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| |||||| | |||||||| || || ||||||||||||
Sbjct 2337648 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2337707
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||| |||||||||| || | ||| |
Sbjct 2337708 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATG 2337767
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||||||||||| || || || || || ||||||
Sbjct 2337768 GTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 2337803
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| ||| ||||| | ||||| || || || || || || || | |||| |
Sbjct 2338272 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCA 2338331
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| |||||| | |||||||| || || ||||||||||||
Sbjct 2338332 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2338391
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||| ||||||| ||||| | ||| |
Sbjct 2338392 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATG 2338451
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || || ||||| ||||| || || || |||||
Sbjct 2338452 GTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494822885076800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |