Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 95.1 1e-14
>seq152203
Length=2432022
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||| ||||| ||||| ||||| || |||||||| || | | || | || |||
Sbjct 2338278 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2338337
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
||||| || || ||| | || | ||||||||||||| ||| | ||| ||||||||
Sbjct 2338338 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2338397
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012
|| || || || | | | || || | ||||| |||| ||| |||||||||
Sbjct 2338398 ATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTTA 2338457
Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042
|| || || ||||| |||||||| ||||||
Sbjct 2338458 CCAGTCAAGGTTTTCACAAAAATCTGCATT 2338487
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||| ||||| ||||| ||||| ||||||||||| || | | || | || |||
Sbjct 2337822 ACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2337881
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
||||| || || ||| | || | ||||||||||||| ||| | ||| ||||||||
Sbjct 2337882 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2337941
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012
|| || || || | | | || || | |||||| ||| | ||| ||||| ||
Sbjct 2337942 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 2338001
Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || || || || ||||| || |||||
Sbjct 2338002 CCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413561500698676
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |