Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 84.2 1e-11
>seq152203
Length=2432022
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201
||| || || | |||| ||||| |||| || || || || || |||||||| |||||
Sbjct 2338259 ACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGA 2338318
Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261
|| || | || |||| |||||||| ||| || || | ||||| |||| |||
Sbjct 2338319 TAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGG 2338378
Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318
||||||||||| || | | | ||| || || | | ||| ||||| |||| |
Sbjct 2338379 GATGCCTTCTTTGTCCTGGATCTTGGCC---TTGACATTCTCAATGGTGTCACTGGGCTC 2338435
Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| || || || || ||||| || || | ||||| || ||||| |||||
Sbjct 2338436 TACCTCGAGGGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/232 (68%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| || || || |||| |||||||||| || || || || || || ||||| ||||
Sbjct 2337346 CACCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAG 2337405
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
| || || | || |||| |||||||| ||| || || | ||||| |||| ||
Sbjct 2337406 ATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGG 2337465
Query 33261 GTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
| ||||||||||| || | | | ||| || || | | ||| ||||| |||| |
Sbjct 2337466 GGATGCCTTCTTTGTCTTGGATCTTGGCC---TTGACGTTCTCAATGGTGTCACTGGGCT 2337522
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || || || || | || || || || || |||||
Sbjct 2337523 CCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317999981294292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |