Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq152203 82.4 5e-11 >seq152203 Length=2432022 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||| ||||| | | |||||||| || || || || || || || || || Sbjct 2337347 ACCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGA 2337406 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| ||| |||| |||| || ||||| ||||| ||||| | ||||| ||| | || Sbjct 2337407 TAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGG 2337466 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| ||| || || ||||| | ||| || || |||||||| Sbjct 2337467 GATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 2337526 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || ||||| || ||||||||||| || ||||| Sbjct 2337527 TTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353912163726792