Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=47594283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 4/89 (4%) Strand=Plus/Plus Query 13434 TCAATAAG----CTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAA 13489 |||||||| || ||||| || ||||| ||||||||||| || |||||||||||||| Sbjct 29604527 TCAATAAGAAGACTGTACATCTCCGAATGGATATTTTCCATAGCAATTTGGAAACCATAG 29604586 Query 13490 AAACATCTAGCCTCTGATACCTGAACTTC 13518 ||||| | ||||||| || ||| ||||| Sbjct 29604587 AAACACCGCGCCTCTGTTATCTGTACTTC 29604615 Score = 82.4 bits (90), Expect = 7e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 12844 TGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCC 12903 |||||| || |||| | |||||||| | ||||| || |||||||| |||||||| || Sbjct 29600054 TGACATTACTCCCATTCTCTGATATTCTCCTACTCTCTTCTCAAAAAAATTTGTTTTCCC 29600113 Query 12904 TTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT 12941 ||| || || || ||||||||||| || || || |||| Sbjct 29600114 TTCCAATGAGATGTTTTCCATAAAGTCAAATGGGTTTT 29600151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429931071499908