Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq152076 143 6e-29
seq152203 140 7e-28
seq171586 138 3e-27
seq152438 125 2e-23
seq152489 104 5e-17
>seq152076
Length=2538501
Score = 143 bits (158), Expect = 6e-29
Identities = 172/234 (74%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | || || || || | || || || ||||| || || ||||||
Sbjct 778990 ATGCCACCCCTCAGGCGTAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCA 779049
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| || || || || ||||| || |||||||| || ||||||
Sbjct 779050 GAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGA 779109
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| || || || || || || || | || || || || |||
Sbjct 779110 GGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCT 779169
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||| || || || ||||| || || || || || ||||| ||||||||||||
Sbjct 779170 ACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTTG 779223
>seq152203
Length=2432022
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| ||||||||||| |||||||||| || | || ||||| || || |||||
Sbjct 2337834 GTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCG 2337893
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | ||||| ||||| || || || |||||||| ||||| ||||| || ||
Sbjct 2337894 GCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTG 2337953
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| || || || || || || || || || ||||| || || | ||
Sbjct 2337954 ACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTC 2338013
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 2338014 TTCACAAAGATCTGCAT 2338030
>seq171586
Length=8203
Score = 138 bits (152), Expect = 3e-27
Identities = 171/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || || || | || || || || | || || || ||||| || || |||||
Sbjct 2653 ATGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCG 2712
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| || || || || ||||| || |||||||| || ||||||
Sbjct 2713 GAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGA 2772
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| || || || || || || || | || || || || |||
Sbjct 2773 GGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCT 2832
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
||||| || || || ||||| || || || || || ||||| ||||||||||||
Sbjct 2833 ACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTTG 2886
>seq152438
Length=1158950
Score = 125 bits (138), Expect = 2e-23
Identities = 108/134 (81%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185
|| ||||| | ||||| ||||| ||||| ||||| || ||||| || || || |||||
Sbjct 125021 GGGGAAAGAGTGGTTGCCTTTGCGGCTGTGGAAGGAATCTTCTTCTCCGGATCCTTTGCT 125080
Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245
|| || |||||| ||||||| || || |||||||| ||||||||||||||||| ||| |
Sbjct 125081 GCCATATTTTGGCTGAAGAAGAGGGGTCTTATGCCTGGATTAACTTTCTCTAATGAACTC 125140
Query 269246 ATAAGCAGGGACGA 269259
|||||| | |||||
Sbjct 125141 ATAAGCCGAGACGA 125154
>seq152489
Length=7015604
Score = 104 bits (114), Expect = 5e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553
|||||||| | | ||||||||||| ||||| | || || ||||||||||||| ||
Sbjct 3176731 TGGTGGTACTTCGTGTCTAAAGGAATTGAATATTTCGACACGGTCTTCTTCATCCTGAGA 3176672
Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTACTTTG 78613
|||||| || || | ||| || ||||| || || || | || |||||||| |||
Sbjct 3176671 AAGAAAAACAACCAGGTCTCTTTCCTCCATGTGTACCACCACTGCACCATGTTTACATTG 3176612
Query 78614 GGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650
| ||||| |||||||| ||| | ||||| |||||||
Sbjct 3176611 TGGTGGATTGGTATTAAGTGGGTGGCAGGGGGACAAG 3176575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1148445669747032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |