Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq152305 107 1e-18
>seq152305
Length=463424
Score = 107 bits (118), Expect = 1e-18
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831
|||| || |||| || || || |||| ||||||||||| || || || ||||| | ||
Sbjct 105877 TCATCTCTTTGTATTCGGCACCAAAATGTCTCCACTGGAAGCCATAAACTGGTCCCAAGT 105936
Query 25832 CTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891
|||| || || ||| |||||| |||||||| ||||| | || |||||||| |
Sbjct 105937 CTCCTTCCTCTCTGGAGGTAAAGCCATGCTTATCCAGGAAGTCCCGAGACCCATTGGCAT 105996
Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940
|||||||| | || || || | ||||| ||||||| |||||||| ||
Sbjct 105997 CCCAGATCCTCACTCCTTTTGCAGAGAGTTCTTTGGCATTTGTGGAGCC 106045
Score = 87.8 bits (96), Expect = 1e-12
Identities = 110/150 (73%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| ||||| || ||||| | |||| ||||||||||||||||| || |||| ||||||
Sbjct 101691 GCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAAGGGCACTCCGAGGCCCATG 101750
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625
| | || || |||||||| ||||| || |||||||| | | ||| || ||||| ||
Sbjct 101751 T-CTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATTCAACACATAGAACTGGCA 101809
Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655
| | | ||| || || ||||| || ||
Sbjct 101810 GAGAGCATGGCAAGGGGGCAGAGCCATCAG 101839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 339307876204242
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |