Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq152305 107 1e-18 >seq152305 Length=463424 Score = 107 bits (118), Expect = 1e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831 |||| || |||| || || || |||| ||||||||||| || || || ||||| | || Sbjct 105877 TCATCTCTTTGTATTCGGCACCAAAATGTCTCCACTGGAAGCCATAAACTGGTCCCAAGT 105936 Query 25832 CTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 |||| || || ||| |||||| |||||||| ||||| | || |||||||| | Sbjct 105937 CTCCTTCCTCTCTGGAGGTAAAGCCATGCTTATCCAGGAAGTCCCGAGACCCATTGGCAT 105996 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||||| | || || || | ||||| ||||||| |||||||| || Sbjct 105997 CCCAGATCCTCACTCCTTTTGCAGAGAGTTCTTTGGCATTTGTGGAGCC 106045 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || ||||| || ||||| | |||| ||||||||||||||||| || |||| |||||| Sbjct 101691 GCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAAGGGCACTCCGAGGCCCATG 101750 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | || || |||||||| ||||| || |||||||| | | ||| || ||||| || Sbjct 101751 T-CTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATTCAACACATAGAACTGGCA 101809 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | | | ||| || || ||||| || || Sbjct 101810 GAGAGCATGGCAAGGGGGCAGAGCCATCAG 101839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339307876204242