Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq152203 93.3 4e-14 >seq152203 Length=2432022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || || ||||| |||| || ||| | || ||||||||||| ||| | | Sbjct 2338296 TCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAG 2338355 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || || | |||||||||| || | | ||| |||||| || || ||||| | | Sbjct 2338356 ATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTC 2338415 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||||||||| || | ||||||||| Sbjct 2338416 TCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTTACCAGTCAAGGTTTTCACA 2338475 Query 48716 AAAATCTGCATCGT 48729 ||||||||||| || Sbjct 2338476 AAAATCTGCATTGT 2338489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420223609564154