Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq152077 152 7e-32
seq152347 123 4e-23
>seq152077
Length=2433926
Score = 152 bits (168), Expect = 7e-32
Identities = 198/274 (72%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 8702 TTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACG 8761
||||||||| |||||| || || | | || |||||||||| || ||
Sbjct 247606 TTGACGTTGGCACAGACGAGCTTGTGCAGCGAGGCCGTCTTGACGATGTTGAAGCCGGTC 247665
Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821
|| || |||||||||||||| |||||||| | || ||||||||| ||| ||| |||
Sbjct 247666 TCCCCTCCGAAGGTGCTGGGCTTCCAGTACTCAGGAGAGCAGATGGGGTTACCCAGGAGA 247725
Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881
|| |||||||| || || || || | ||||| |||||||| |||||||||| ||||||
Sbjct 247726 CCCTTGAGGGAGAAAGGCGCGCCGATCTCGACCATGCTCTCCCCGAAGATGGAGTTGGGC 247785
Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGG 8941
|| ||| |||| || | || | ||| ||||||| ||| |||||||| ||||| ||
Sbjct 247786 TGGCACTTCTCCAGCAGCAGCCCCGGGTAGAACTCCAGAGCATCGATGTCACCGTACAGC 247845
Query 8942 GCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975
|| |||||||| || | |||| || ||||
Sbjct 247846 TCCTGCAGTTCGGCTGCCTTCTCCTGCTCGCCTG 247879
>seq152347
Length=13568040
Score = 123 bits (136), Expect = 4e-23
Identities = 172/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681
||||| || || ||||| |||| | ||||| ||| || || || || | | ||
Sbjct 9546001 ATGAGCCGGGTCGTCTGGAACAAGCGCTCGTCGTCCCACTCCGGGTGCTCCTGCGTAAGG 9546060
Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741
|| || ||||| | ||||||||||| |||||| || || ||||||||||| || || ||
Sbjct 9546061 ACGTCACACACGCGGTTGTGTTCCCGGAGCCATATCGTGGCGTACATCATCAGCCCGGGG 9546120
Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801
|||||||| || |||| || ||||| || | |||| | ||||| | | || ||
Sbjct 9546121 ACCAGGCCGAACACCTCCTGCCCGACGGCGAACCGCAGGTGCTCGGGGATGTGAGGTGGG 9546180
Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861
|| ||||| | |||| |||||| || | ||| || |||||||| || ||||| |||
Sbjct 9546181 TAAATCATTTCTGCCTGAGTATCTTTCACAGTGGGAGGGTACATTTCTCCATCAATCATC 9546240
Query 9862 T 9862
|
Sbjct 9546241 T 9546241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 706752124089760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |