Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq152077 152 7e-32 seq152347 123 4e-23 >seq152077 Length=2433926 Score = 152 bits (168), Expect = 7e-32 Identities = 198/274 (72%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 8702 TTGACGTTGCTACAGACTAGAGACTGGATAGTTGCACTCTTGACGATCCCAAACCCCACG 8761 ||||||||| |||||| || || | | || |||||||||| || || Sbjct 247606 TTGACGTTGGCACAGACGAGCTTGTGCAGCGAGGCCGTCTTGACGATGTTGAAGCCGGTC 247665 Query 8762 TCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTCGCCATGAGG 8821 || || |||||||||||||| |||||||| | || ||||||||| ||| ||| ||| Sbjct 247666 TCCCCTCCGAAGGTGCTGGGCTTCCAGTACTCAGGAGAGCAGATGGGGTTACCCAGGAGA 247725 Query 8822 CCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATGGCGTTGGGA 8881 || |||||||| || || || || | ||||| |||||||| |||||||||| |||||| Sbjct 247726 CCCTTGAGGGAGAAAGGCGCGCCGATCTCGACCATGCTCTCCCCGAAGATGGAGTTGGGC 247785 Query 8882 CGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCTCCGTAAAGG 8941 || ||| |||| || | || | ||| ||||||| ||| |||||||| ||||| || Sbjct 247786 TGGCACTTCTCCAGCAGCAGCCCCGGGTAGAACTCCAGAGCATCGATGTCACCGTACAGC 247845 Query 8942 GCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || |||||||| || | |||| || |||| Sbjct 247846 TCCTGCAGTTCGGCTGCCTTCTCCTGCTCGCCTG 247879 >seq152347 Length=13568040 Score = 123 bits (136), Expect = 4e-23 Identities = 172/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681 ||||| || || ||||| |||| | ||||| ||| || || || || | | || Sbjct 9546001 ATGAGCCGGGTCGTCTGGAACAAGCGCTCGTCGTCCCACTCCGGGTGCTCCTGCGTAAGG 9546060 Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741 || || ||||| | ||||||||||| |||||| || || ||||||||||| || || || Sbjct 9546061 ACGTCACACACGCGGTTGTGTTCCCGGAGCCATATCGTGGCGTACATCATCAGCCCGGGG 9546120 Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801 |||||||| || |||| || ||||| || | |||| | ||||| | | || || Sbjct 9546121 ACCAGGCCGAACACCTCCTGCCCGACGGCGAACCGCAGGTGCTCGGGGATGTGAGGTGGG 9546180 Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861 || ||||| | |||| |||||| || | ||| || |||||||| || ||||| ||| Sbjct 9546181 TAAATCATTTCTGCCTGAGTATCTTTCACAGTGGGAGGGTACATTTCTCCATCAATCATC 9546240 Query 9862 T 9862 | Sbjct 9546241 T 9546241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 706752124089760