Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq152203 100 3e-16 seq110089 82.4 7e-11 seq44231 82.4 7e-11 >seq152203 Length=2432022 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| || ||||| ||| | |||||| |||| |||| | | Sbjct 2338487 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGAGCCCAG 2338428 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | ||||| ||||| ||||||||||| || || || ||||| Sbjct 2338427 TGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCA 2338368 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || ||| | || | | ||| || || || ||||||| | | | | ||||| || Sbjct 2338367 GCAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAA 2338308 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || ||||||||| | || |||| ||| | || || || || Sbjct 2338307 TATCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGG 2338260 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | |||||| | ||| | || | | Sbjct 2337574 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337515 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | ||||| ||||| ||||||||||| || || || ||||| Sbjct 2337514 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 2337455 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | ||| || || || ||||||| | | | | ||||| ||| Sbjct 2337454 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337395 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || ||||||||| | ||| |||||||| | | || ||||| Sbjct 2337394 ATCCAGAAGGAATCTACTCTGCATTTGGTCCTGCGCTTGAGGGGAGG 2337348 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | |||||| | ||| | || | | Sbjct 2337802 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337743 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | ||||| ||||| ||||||||||| || || || ||||| Sbjct 2337742 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337683 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | ||| || || || ||||||| | | | | ||||| ||| Sbjct 2337682 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337623 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || ||||| ||| | || |||||||| | || ||||| || Sbjct 2337622 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCCTCAGAGGTGG 2337576 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || || || || | |||||| | ||| | || | | Sbjct 2338030 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337971 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | ||||| ||||| ||||||||||| || || || ||||| Sbjct 2337970 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337911 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | ||| || || || ||||||| | | | | ||||| || Sbjct 2337910 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2337851 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || ||||||||| | || |||| ||| | || || || || Sbjct 2337850 ATTCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGG 2337804 >seq110089 Length=761 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 || || || || || || | ||||||||||||||||||||| ||||| |||||||||||| Sbjct 583 GAAGGGAAGATGCATGGTTTCCTACGCATGTACTGGGCCAAGAAGATCCTCGAGTGGACT 524 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGT 71801 | | |||||| |||| || |||| Sbjct 523 CGCTCCCCCGAGGAGGCCCTTGAGT 499 >seq44231 Length=1497 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 || || || || || || | ||||||||||||||||||||| ||||| |||||||||||| Sbjct 517 GAAGGGAAGATGCATGGTTTCCTACGCATGTACTGGGCCAAGAAGATCCTCGAGTGGACT 458 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGT 71801 | | |||||| |||| || |||| Sbjct 457 CGCTCCCCCGAGGAGGCCCTTGAGT 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477464822574880