Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 100 3e-16
seq110089 82.4 7e-11
seq44231 82.4 7e-11
>seq152203
Length=2432022
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
|||||| | ||||| ||||| || ||||| ||| | |||||| |||| |||| | |
Sbjct 2338487 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGAGCCCAG 2338428
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|||||||| ||| | ||||| ||||| ||||||||||| || || || |||||
Sbjct 2338427 TGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCA 2338368
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| ||| | || | | ||| || || || ||||||| | | | | ||||| ||
Sbjct 2338367 GCAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAA 2338308
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || ||||||||| | || |||| ||| | || || || ||
Sbjct 2338307 TATCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGG 2338260
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || || || || || | |||||| | ||| | || | |
Sbjct 2337574 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337515
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||||||||| || || || |||||
Sbjct 2337514 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 2337455
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | || | | ||| || || || ||||||| | | | | ||||| |||
Sbjct 2337454 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337395
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || ||||||||| | ||| |||||||| | | || |||||
Sbjct 2337394 ATCCAGAAGGAATCTACTCTGCATTTGGTCCTGCGCTTGAGGGGAGG 2337348
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || || || || || | |||||| | ||| | || | |
Sbjct 2337802 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337743
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||||||||| || || || |||||
Sbjct 2337742 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337683
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | || | | ||| || || || ||||||| | | | | ||||| |||
Sbjct 2337682 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337623
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || ||||| ||| | || |||||||| | || ||||| ||
Sbjct 2337622 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCCTCAGAGGTGG 2337576
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || || || || || | |||||| | ||| | || | |
Sbjct 2338030 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337971
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||||||||| || || || |||||
Sbjct 2337970 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337911
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| ||| | || | | ||| || || || ||||||| | | | | ||||| ||
Sbjct 2337910 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2337851
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || ||||||||| | || |||| ||| | || || || ||
Sbjct 2337850 ATTCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGG 2337804
>seq110089
Length=761
Score = 82.4 bits (90), Expect = 7e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776
|| || || || || || | ||||||||||||||||||||| ||||| ||||||||||||
Sbjct 583 GAAGGGAAGATGCATGGTTTCCTACGCATGTACTGGGCCAAGAAGATCCTCGAGTGGACT 524
Query 71777 CAAACTCCCGAGCAGGCGCTCGAGT 71801
| | |||||| |||| || ||||
Sbjct 523 CGCTCCCCCGAGGAGGCCCTTGAGT 499
>seq44231
Length=1497
Score = 82.4 bits (90), Expect = 7e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776
|| || || || || || | ||||||||||||||||||||| ||||| ||||||||||||
Sbjct 517 GAAGGGAAGATGCATGGTTTCCTACGCATGTACTGGGCCAAGAAGATCCTCGAGTGGACT 458
Query 71777 CAAACTCCCGAGCAGGCGCTCGAGT 71801
| | |||||| |||| || ||||
Sbjct 457 CGCTCCCCCGAGGAGGCCCTTGAGT 433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477464822574880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |