Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq152203 109 5e-19 >seq152203 Length=2432022 Score = 109 bits (120), Expect = 5e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| || ||||| ||| | || ||| |||| || ||| ||| Sbjct 2338487 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGAGCCCAG 2338428 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | ||||| ||||| |||||||||||||| || || ||||| Sbjct 2338427 TGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCA 2338368 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||||| |||| | | ||| ||||| || ||||||| Sbjct 2338367 GCAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATG 2338330 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || ||| | ||||| ||| ||| Sbjct 2337574 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337515 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| |||||||||||||| || || ||||| Sbjct 2337514 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 2337455 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||| ||||| || ||||||| | | | | || || ||| Sbjct 2337454 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337395 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || |||||||| | ||||| || | | ||||| ||||| Sbjct 2337394 ATCCAGAAGGAATCTACTCTGCATTTGGTCCTGCGCTTGAGGGGAGG 2337348 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || ||| | ||||| ||| ||| Sbjct 2338030 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337971 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| |||||||||||||| || || ||||| Sbjct 2337970 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337911 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | ||| ||||| || ||||||| | | | | || || || Sbjct 2337910 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2337851 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || |||||||| Sbjct 2337850 ATTCAGAAGGAATCTAC 2337834 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || ||| | ||||| ||| ||| Sbjct 2337802 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337743 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| |||||||||||||| || || ||||| Sbjct 2337742 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337683 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||||| |||| | | ||| ||||| || ||||||| Sbjct 2337682 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATG 2337646 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || ||| | ||||| ||| ||| Sbjct 2338258 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2338199 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| |||||||||||||| || || ||||| Sbjct 2338198 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2338139 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 |||||| |||| | | ||| ||||| || ||||||| Sbjct 2338138 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATG 2338102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428887224063870