Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq152076 96.9 3e-15 seq171586 91.5 1e-13 >seq152076 Length=2538501 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || ||||| || || | || || ||||||||||| Sbjct 778223 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 778164 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| ||||||| ||||||||||| || || ||||| Sbjct 778163 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATTCAGAAGGAGTCCAC 778111 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || ||||| || || | || || ||||||||||| Sbjct 778907 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 778848 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| ||||||| ||||||||||| || || ||||| Sbjct 778847 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATTCAGAAGGAGTCCAC 778795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || ||| Sbjct 778763 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 778704 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| || ||||| ||||| || || ||||| || Sbjct 778703 GACACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAGGGCATCCCCCCCGACCAG 778644 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||||||||| ||| | || ||| |||||| ||||||| |||||| Sbjct 778643 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 778584 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 778583 ATTCAGAAGGAGTCCAC 778567 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || ||||| || || | || || ||||||||||| Sbjct 778451 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 778392 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| ||||||| |||||||| || || || ||||| Sbjct 778391 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 778339 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| |||||||| || || | || || || || |||| || || || || Sbjct 779225 GTCAAAATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAG 779166 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || || | || | | || ||||| || |||||||| || || || || Sbjct 779165 CCCAGTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCT 779106 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||||||||| ||| | || ||| ||||| |||| || Sbjct 779105 GACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCTGAC 779046 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || || || ||||| Sbjct 779045 TACAACATCCAGAAGGAGTCCAC 779023 >seq171586 Length=8203 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || ||||| || || | || || ||||||||||| Sbjct 2114 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 2055 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| ||||||| |||||||| || || || ||||| Sbjct 2054 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 2002 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || ||||| || || | || || ||||||||||| Sbjct 2342 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 2283 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| ||||||| |||||||| || || || ||||| Sbjct 2282 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 2230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| || || || || || || | || || ||||||||||| Sbjct 1886 AAAATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTGATCTTTGCCGGCAAG 1827 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| ||||||| |||||||| || || || ||||| Sbjct 1826 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 1774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || || ||||| |||||||| || || | || || || || |||| || || || || Sbjct 2888 GTCAAAATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAG 2829 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 ||| || || | || | | || ||||| || |||||||| || || || || Sbjct 2828 CCCAGTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCT 2769 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || || | || || ||||||||||| ||| | || ||| ||||| ||||||| Sbjct 2768 GACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCCGAC 2709 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || || || ||||| Sbjct 2708 TACAACATCCAGAAGGAGTCCAC 2686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418704125223010