Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq152076 96.9 3e-15
seq171586 91.5 1e-13
>seq152076
Length=2538501
Score = 96.9 bits (106), Expect = 3e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || ||||| || || | || || |||||||||||
Sbjct 778223 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 778164
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| ||||||| ||||||||||| || || |||||
Sbjct 778163 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATTCAGAAGGAGTCCAC 778111
Score = 96.9 bits (106), Expect = 3e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || ||||| || || | || || |||||||||||
Sbjct 778907 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 778848
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| ||||||| ||||||||||| || || |||||
Sbjct 778847 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATTCAGAAGGAGTCCAC 778795
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| || || || || |||
Sbjct 778763 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 778704
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||||| || ||||| ||||| || || ||||| ||
Sbjct 778703 GACACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAGGGCATCCCCCCCGACCAG 778644
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||||||||| ||| | || ||| |||||| ||||||| ||||||
Sbjct 778643 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 778584
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || || |||||
Sbjct 778583 ATTCAGAAGGAGTCCAC 778567
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || ||||| || || | || || |||||||||||
Sbjct 778451 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 778392
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| ||||||| |||||||| || || || |||||
Sbjct 778391 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 778339
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||| |||||||| || || | || || || || |||| || || || ||
Sbjct 779225 GTCAAAATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAG 779166
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
||| || || | || | | || ||||| || |||||||| || || || ||
Sbjct 779165 CCCAGTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCT 779106
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || | || || ||||||||||| ||| | || ||| ||||| |||| ||
Sbjct 779105 GACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCTGAC 779046
Query 22393 TACAACATTCAAAAAGAATCCAC 22415
|||||||| || || || |||||
Sbjct 779045 TACAACATCCAGAAGGAGTCCAC 779023
>seq171586
Length=8203
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || ||||| || || | || || |||||||||||
Sbjct 2114 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 2055
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| ||||||| |||||||| || || || |||||
Sbjct 2054 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 2002
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || ||||| || || | || || |||||||||||
Sbjct 2342 AAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGAGGCTGATCTTTGCCGGCAAG 2283
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| ||||||| |||||||| || || || |||||
Sbjct 2282 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 2230
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| || || || || || || | || || |||||||||||
Sbjct 1886 AAAATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGAGGCTGATCTTTGCCGGCAAG 1827
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| ||||||| |||||||| || || || |||||
Sbjct 1826 CAGCTTGAAGATGGCCGCACACTCTCCGACTACAACATCCAGAAGGAGTCCAC 1774
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| || ||||| |||||||| || || | || || || || |||| || || || ||
Sbjct 2888 GTCAAAATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAG 2829
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
||| || || | || | | || ||||| || |||||||| || || || ||
Sbjct 2828 CCCAGTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCT 2769
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || || | || || ||||||||||| ||| | || ||| ||||| |||||||
Sbjct 2768 GACCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCCGAC 2709
Query 22393 TACAACATTCAAAAAGAATCCAC 22415
|||||||| || || || |||||
Sbjct 2708 TACAACATCCAGAAGGAGTCCAC 2686
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418704125223010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |