Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq122765 95.1 2e-14
seq152500 93.3 9e-14
seq106403 93.3 9e-14
seq83570 93.3 9e-14
seq160254 89.7 1e-12
seq156661 89.7 1e-12
seq155848 89.7 1e-12
seq152859 89.7 1e-12
seq152416 89.7 1e-12
seq7 89.7 1e-12
seq152039 86.0 1e-11
seq3345 86.0 1e-11
>seq122765
Length=724
Score = 95.1 bits (104), Expect = 2e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
|||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||
Sbjct 457 GTCTCTGTGGCGCAATGGACCAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 398
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 397 TCCCGGCAGAGA 386
>seq152500
Length=393280
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 71581 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 71640
Query 142564 CCCACATCGGGCAGAAGTC 142582
||||| | |||| |||||
Sbjct 71641 CCCACGTTGGGCGCAAGTC 71659
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 73464 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 73523
Query 142564 CCCACATCGGGCAGAAGTC 142582
||||| | |||| |||||
Sbjct 73524 CCCACGTTGGGCGCAAGTC 73542
>seq106403
Length=1065
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 388 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 447
Query 142564 CCCACATCGGGCAGAAGTC 142582
||||| | |||| |||||
Sbjct 448 CCCACGTTGGGCGCAAGTC 466
>seq83570
Length=1832
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 598 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 539
Query 142564 CCCACATCGGGCAGAAGTC 142582
||||| | |||| |||||
Sbjct 538 CCCACGTTGGGCGCAAGTC 520
>seq160254
Length=20074
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2109 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2050
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 2049 CCCACGTTGGGC 2038
>seq156661
Length=27803
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 25564 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 25623
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 25624 CCCACGTTGGGC 25635
>seq155848
Length=31530
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 25351 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 25292
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 25291 CCCACGTTGGGC 25280
>seq152859
Length=288289
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 86575 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 86634
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 86635 CCCACGTTGGGC 86646
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 112888 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 112829
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 112828 CCCACGTTGGGC 112817
>seq152416
Length=123331
Score = 89.7 bits (98), Expect = 1e-12
Identities = 67/79 (85%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||
Sbjct 65342 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTGC 65283
Query 142564 CCCACATCGGGCAGAAGTC 142582
||||| | |||| |||||
Sbjct 65282 CCCACGTTGGGCGCAAGTC 65264
>seq7
Length=40039088
Score = 89.7 bits (98), Expect = 1e-12
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 142495 GGTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTG 142554
||| || || ||| | ||||||||||||||||||| ||||||||||||| |||||||
Sbjct 38727797 GGTTAGGTA-CCCAGCTAGCTCAGTCGGTAGAGCGTGAGACTCTTAATCTCAGGGTCGTG 38727739
Query 142555 GGTTCGAGCCCCACATCGGGC 142575
|||||||||||||| | ||||
Sbjct 38727738 GGTTCGAGCCCCACGTTGGGC 38727718
>seq152039
Length=2356998
Score = 86.0 bits (94), Expect = 1e-11
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 142506 CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCC 142565
|||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||||
Sbjct 2180987 CCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTGCCC 2180928
Query 142566 CACATCGGGCAGAAGTC 142582
||| | |||| |||||
Sbjct 2180927 CACGTTGGGCGCAAGTC 2180911
>seq3345
Length=809
Score = 86.0 bits (94), Expect = 1e-11
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct 286 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCATGGGTTCGAGC 227
Query 142564 CCCACAT 142570
|||||||
Sbjct 226 CCCACAT 220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1025200940149514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |