Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq171586 181 2e-40 seq152076 178 2e-39 seq152203 147 4e-30 seq105056 132 9e-26 >seq171586 Length=8203 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || |||||||| || ||||||||||| | Sbjct 2209 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGG 2268 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || |||||||| || ||||| ||| Sbjct 2269 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCC 2328 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 2329 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 2388 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| |||||||| ||||| |||||||| Sbjct 2389 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2426 Score = 179 bits (198), Expect = 7e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || |||||||| || ||||||||||| | Sbjct 2665 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGA 2724 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || ||||| || || ||||||||| Sbjct 2725 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 2784 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 2785 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 2844 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || ||||| |||||||| || || ||||||||| || Sbjct 2845 ATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTTG 2886 Score = 178 bits (196), Expect = 2e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || |||||||| || ||||||||||| | Sbjct 1981 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGG 2040 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || |||||||| || ||||| ||| Sbjct 2041 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCC 2100 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 2101 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 2160 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || |||||||| ||||| |||||||| Sbjct 2161 ATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 2198 Score = 168 bits (186), Expect = 1e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || |||||||| || ||||||||||| | Sbjct 1753 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGG 1812 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || ||||| || || ||||| ||| Sbjct 1813 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCC 1872 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 1873 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 1932 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || || ||||| ||||| |||||||| Sbjct 1933 ATGGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 1970 >seq152076 Length=2538501 Score = 178 bits (196), Expect = 2e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || || ||||| || ||||||||||| | Sbjct 778090 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGG 778149 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || |||||||| || ||||| ||| Sbjct 778150 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCC 778209 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 778210 TTGTCCTGGATTTTAGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 778269 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| |||||||| ||||| |||||||| Sbjct 778270 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778307 Score = 178 bits (196), Expect = 2e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || |||||||| || ||||||||||| | Sbjct 778318 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGG 778377 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || |||||||| || ||||| ||| Sbjct 778378 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCC 778437 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 778438 TTGTCCTGGATTTTAGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 778497 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || |||||||| ||||| |||||||| Sbjct 778498 ATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 778535 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | || | ||| || |||||||| || |||||||| || || |||||||| | Sbjct 779002 AGGCGTAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGA 779061 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || ||||| || || ||||||||| Sbjct 779062 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 779121 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 779122 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 779181 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || ||||| |||||||| || || ||||||||| || Sbjct 779182 ATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTTG 779223 Score = 168 bits (186), Expect = 1e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || || ||||| || ||||||||||| | Sbjct 778546 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGG 778605 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || |||||||| || ||||| || Sbjct 778606 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCT 778665 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| || ||| || ||||| | ||||| |||| |||| Sbjct 778666 TTGTCCTGGATTTTGGCCTTCACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 778725 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| |||||||| ||||| |||||||| Sbjct 778726 ATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778763 Score = 168 bits (186), Expect = 1e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || || ||||| || ||||||||||| | Sbjct 778774 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGG 778833 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || |||||||| || ||||| ||| Sbjct 778834 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCC 778893 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || || || ||||| ||| ||| || ||||| | ||||| |||| |||| Sbjct 778894 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 778953 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || || ||||| ||||| |||||||| Sbjct 778954 ATGGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 778991 >seq152203 Length=2432022 Score = 147 bits (162), Expect = 4e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| |||||||| || || || || || ||||| || || || || | || | | Sbjct 2338269 AGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGC 2338328 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || | ||| || || || || || |||||||| Sbjct 2338329 CCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCT 2338388 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| |||||||| ||| |||||||| | ||||| || | |||| Sbjct 2338389 TTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTG 2338448 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||||| || || | ||| || || || ||||||||| Sbjct 2338449 ATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2338487 >seq105056 Length=1238 Score = 132 bits (146), Expect = 9e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | ||| || |||||||| || |||||||| || ||||||||||| | Sbjct 584 AGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGA 643 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || || || ||||| || || ||||||||| Sbjct 644 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 703 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||| || || || ||||| ||| ||| || ||||| Sbjct 704 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTC 741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919316569876880