Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq171586 131 4e-25
seq152076 127 5e-24
seq105056 89.7 1e-12
>seq171586
Length=8203
Score = 131 bits (144), Expect = 4e-25
Identities = 146/195 (75%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 2692 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAG 2751
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| ||||| || ||||||||||| || ||||||||
Sbjct 2752 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTC 2811
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| ||
Sbjct 2812 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACA 2871
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 2872 AAAATCTGCATTTTG 2886
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 1780 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 1839
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| || || || ||||||||||| || ||||||||
Sbjct 1840 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTC 1899
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 1900 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCACG 1959
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 1960 AAGATCTGCAT 1970
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 2008 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 2067
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || ||||| || || || ||||||||||| || ||||||||
Sbjct 2068 ATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTC 2127
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 2128 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 2187
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2188 AAGATCTGCAT 2198
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 2236 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 2295
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || ||||| || || || ||||||||||| || ||||||||
Sbjct 2296 ATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTC 2355
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 2356 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 2415
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2416 AAGATCTGCAT 2426
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||| ||||| || ||||| | || || || || |||
Sbjct 2464 TCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 2523
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| || ||||| ||||||||||| || ||||| ||
Sbjct 2524 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTCACATTC 2583
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 2584 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 2643
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 2644 AAGATCTGCAT 2654
>seq152076
Length=2538501
Score = 127 bits (140), Expect = 5e-24
Identities = 145/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||| | ||| ||||| || ||||| | || || || || |||
Sbjct 779029 TCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAG 779088
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| ||||| || ||||||||||| || ||||||||
Sbjct 779089 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTC 779148
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| ||
Sbjct 779149 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACA 779208
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 779209 AAAATCTGCATTTTG 779223
Score = 123 bits (136), Expect = 6e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 778345 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 778404
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || ||||| || || || ||||||||||| || ||||||||
Sbjct 778405 ATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTC 778464
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 778465 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 778524
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 778525 AAGATCTGCAT 778535
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 778117 TCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 778176
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || ||||| || || || ||||||||||| || ||||||||
Sbjct 778177 ATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTC 778236
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 778237 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 778296
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 778297 AAGATCTGCAT 778307
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 778573 TCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 778632
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || ||||| || ||||| ||||||||||| || ||||| ||
Sbjct 778633 ATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTCACATTC 778692
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 778693 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 778752
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 778753 AAGATCTGCAT 778763
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 778801 TCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAG 778860
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || ||||| || || || ||||||||||| || ||||||||
Sbjct 778861 ATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTC 778920
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| || || ||||| ||||| || ||||| ||||| |||
Sbjct 778921 TCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCACG 778980
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 778981 AAGATCTGCAT 778991
>seq105056
Length=1238
Score = 89.7 bits (98), Expect = 1e-12
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| || ||||| | || || || || |||
Sbjct 611 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGGCAAAG 670
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | ||| || | ||||| ||||| || ||||||||||| || ||||||||
Sbjct 671 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTC 730
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | ||||| | | ||| | ||| || || |||||| ||
Sbjct 731 TCAATTGTGTCACTGGGCTCTACACCACCGGCGATGGACTTGCCCCCCAAAGTCTTCACT 790
Query 288463 AATATCT 288469
| |||||
Sbjct 791 ATTATCT 797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176629207994412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |