Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq152076 134 1e-26 seq171586 131 2e-25 seq152203 123 2e-23 seq105056 100 3e-16 >seq152076 Length=2538501 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||||||||| || | || ||||| | |||||||||||||||||| Sbjct 778567 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778626 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||||||||| || || || ||||| || || ||||| ||| Sbjct 778627 GCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTC 778686 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 778687 ACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 778746 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 778747 TTCACGAAGATCTGCAT 778763 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||||||||| || | || ||||| | |||||||||||||||||| Sbjct 778111 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778170 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||||||||| || || || || || || ||||| ||| Sbjct 778171 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTC 778230 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 778231 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 778290 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 778291 TTCACGAAGATCTGCAT 778307 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||||||||| || | || ||||| | |||||||||||||||||| Sbjct 778795 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778854 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||||||||| || || || || || || ||||| ||| Sbjct 778855 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 778914 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 778915 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 778974 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 778975 TTCACGAAGATCTGCAT 778991 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 779023 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 779082 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| ||||| || ||||| || || || ||||| ||| Sbjct 779083 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 779142 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 779143 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 779202 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || ||||| |||||||| Sbjct 779203 TTCACAAAAATCTGCATTTT 779222 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 778339 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 778398 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||||||||| || || || || || || ||||| ||| Sbjct 778399 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTC 778458 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 778459 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 778518 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 778519 TTCACGAAGATCTGCAT 778535 >seq171586 Length=8203 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 2686 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 2745 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| ||||| || ||||| || || || ||||| ||| Sbjct 2746 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 2805 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 2806 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2865 Query 64427 TTTACGAAAATTTGCATTTT 64446 || || ||||| |||||||| Sbjct 2866 TTCACAAAAATCTGCATTTT 2885 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 2002 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2061 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||||||||| || || || || || || ||||| ||| Sbjct 2062 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 2121 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 2122 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 2181 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 2182 TTCACGAAGATCTGCAT 2198 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 2230 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2289 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||||||||| || || || || || || ||||| ||| Sbjct 2290 GCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 2349 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 2350 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2409 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 2410 TTCACGAAGATCTGCAT 2426 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 2458 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 2517 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || ||||| || || ||||| ||| Sbjct 2518 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTC 2577 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 2578 ACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTC 2637 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 2638 TTCACGAAGATCTGCAT 2654 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 1774 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCG 1833 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || || || || || || || || ||||| ||| Sbjct 1834 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTC 1893 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || || | || | ||||||||| |||| || Sbjct 1894 ACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 1953 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 1954 TTCACGAAGATCTGCAT 1970 >seq152203 Length=2432022 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| | || || | ||| | || ||||| || || |||||||| || | Sbjct 2337347 ACCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGA 2337406 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||||| | ||||| |||||||| |||||| | || | | |||||| || || || Sbjct 2337407 TAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGG 2337466 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || || ||| || ||| | || |||| || ||||| Sbjct 2337467 GATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 2337526 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||||||||| || || || || || ||||| Sbjct 2337527 TTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | | ||||||| | ||||| |||||||| ||| Sbjct 2337606 GTGGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCG 2337665 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | | |||||| || || || || |||||||| || || || || ||| Sbjct 2337666 GCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTG 2337725 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || |||||||| | || | ||||||||||||||| || Sbjct 2337726 ACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTC 2337785 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 2337786 TTCACAAAGATCTGCAT 2337802 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || ||||| ||||| || | | ||||||| | ||||| |||||||| ||| Sbjct 2337834 GTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCG 2337893 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | | |||||| || || || || |||||||| || || || || ||| Sbjct 2337894 GCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTG 2337953 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || |||||||| | || | ||||||||||||||| || Sbjct 2337954 ACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTC 2338013 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 2338014 TTCACAAAGATCTGCAT 2338030 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || || ||||| || | | ||||||| | ||||| |||||||| ||| Sbjct 2338062 GTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCG 2338121 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | | |||||| || || || || |||||||| || || || || ||| Sbjct 2338122 GCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTG 2338181 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || |||| || |||||||| | || | ||||||||||||||| || Sbjct 2338182 ACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTC 2338241 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 2338242 TTCACAAAGATCTGCAT 2338258 >seq105056 Length=1238 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | || ||||| | |||||||||||||||||| Sbjct 605 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCAAGCTGCTTGCCG 664 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| ||||| || ||||| || || || ||||| ||| Sbjct 665 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTC 724 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||| |||| || || || | | | | || |||||| |||||| Sbjct 725 ACGTTCTCAATTGTGTCACTGGGCTCTACACCACCGGCGATGGACTTGCCCCCCAAAGTC 784 Query 64427 TTTAC 64431 || || Sbjct 785 TTCAC 789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498394726183760