Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 91.5 1e-13
seq171586 87.8 2e-12
seq152282 86.0 6e-12
seq152076 82.4 8e-11
>seq152203
Length=2432022
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| ||| || || | | || ||||| || || |||||||| | || |||
Sbjct 2338272 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCA 2338331
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
|| || || || || |||| | |||| | | ||| || ||||| || || |||||||||
Sbjct 2338332 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2338391
Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579
|| ||| || || | | || | |||||| | | ||| ||||||| || |
Sbjct 2338392 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATG 2338451
Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||||||||||| ||||| ||||||||||||||
Sbjct 2338452 GTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
>seq171586
Length=8203
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478
|||||||| || |||||||||||| | ||| |||| || || || || || ||||
Sbjct 2689 GACTCCTTCTGGATGTTGTAGTCG--GAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGG 2746
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
| |||| || | ||| ||||| ||||| || ||||| ||||| |||||| || |
Sbjct 2747 CAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCA 2806
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
| || | ||||| | | ||| ||||| | || | || || || ||||| || |
Sbjct 2807 CGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCT 2866
Query 138599 TTACAAAAATCTGCAT 138614
| ||||||||||||||
Sbjct 2867 TCACAAAAATCTGCAT 2882
>seq152282
Length=256244
Score = 86.0 bits (94), Expect = 6e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699
|||||| ||||| || | ||| |||||||| ||||| ||| |||| || ||||| |
Sbjct 182823 TGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGGT 182882
Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751
|||| || ||||| || | ||| ||| ||||||||||||| ||||||||
Sbjct 182883 TGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTC 182934
>seq152076
Length=2538501
Score = 82.4 bits (90), Expect = 8e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | || || || || || || || |||| |
Sbjct 778798 GACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 778857
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| || | ||| ||||| ||||| || || || ||||| |||||| || |
Sbjct 778858 AAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACG 778917
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||||| | | ||| ||||| | || | || || |||||||| || ||
Sbjct 778918 TTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTC 778977
Query 138601 ACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 778978 ACGAAGATCTGCATG 778992
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478
|||||||| || ||||||||||| | ||| |||| || || || || || ||||
Sbjct 779026 GACTCCTTCTGGATGTTGTAGTCAG--AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGG 779083
Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538
| |||| || | ||| ||||| ||||| || ||||| ||||| |||||| || |
Sbjct 779084 CAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCA 779143
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
| || | ||||| | | ||| ||||| | || | || || || ||||| || |
Sbjct 779144 CGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCT 779203
Query 138599 TTACAAAAATCTGCAT 138614
| ||||||||||||||
Sbjct 779204 TCACAAAAATCTGCAT 779219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 495020788694880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |