Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq152203 91.5 1e-13 seq171586 87.8 2e-12 seq152282 86.0 6e-12 seq152076 82.4 8e-11 >seq152203 Length=2432022 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| ||| || || | | || ||||| || || |||||||| | || ||| Sbjct 2338272 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCA 2338331 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || || || || |||| | |||| | | ||| || ||||| || || ||||||||| Sbjct 2338332 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2338391 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | |||||| | | ||| ||||||| || | Sbjct 2338392 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATG 2338451 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||||||| ||||| |||||||||||||| Sbjct 2338452 GTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486 >seq171586 Length=8203 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA--GTCCTCGAGTTGTTTACCGG 138478 |||||||| || |||||||||||| | ||| |||| || || || || || |||| Sbjct 2689 GACTCCTTCTGGATGTTGTAGTCG--GAGAGTGTGCGACCATCTTCAAGCTGCTTGCCGG 2746 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| ||||| ||||| || ||||| ||||| |||||| || | Sbjct 2747 CAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCA 2806 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | ||||| | | ||| ||||| | || | || || || ||||| || | Sbjct 2807 CGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCT 2866 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||||||||| Sbjct 2867 TCACAAAAATCTGCAT 2882 >seq152282 Length=256244 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||||| ||||| || | ||| |||||||| ||||| ||| |||| || ||||| | Sbjct 182823 TGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGGT 182882 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751 |||| || ||||| || | ||| ||| ||||||||||||| |||||||| Sbjct 182883 TGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTC 182934 >seq152076 Length=2538501 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | || || || || || || || |||| | Sbjct 778798 GACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 778857 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| ||||| || || || ||||| |||||| || | Sbjct 778858 AAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACG 778917 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | | ||| ||||| | || | || || |||||||| || || Sbjct 778918 TTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTC 778977 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 778978 ACGAAGATCTGCATG 778992 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478 |||||||| || ||||||||||| | ||| |||| || || || || || |||| Sbjct 779026 GACTCCTTCTGGATGTTGTAGTCAG--AGAGTGTGCGACCATCTTCAAGCTGCTTGCCGG 779083 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| ||||| ||||| || ||||| ||||| |||||| || | Sbjct 779084 CAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTCA 779143 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | ||||| | | ||| ||||| | || | || || || ||||| || | Sbjct 779144 CGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCT 779203 Query 138599 TTACAAAAATCTGCAT 138614 | |||||||||||||| Sbjct 779204 TCACAAAAATCTGCAT 779219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495020788694880