Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq152347 170 3e-37
seq152077 109 8e-19
>seq152347
Length=13568040
Score = 170 bits (188), Expect = 3e-37
Identities = 223/306 (73%), Gaps = 2/306 (1%)
Strand=Plus/Plus
Query 8875 AACTCGGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGT 8934
||| | ||||| || || || || |||||||| || || || || | ||| | |
Sbjct 9543477 AACACTGAACGAGGTGAAGGGGCAGCCCTTCACGTTATTGCAGATCAGCGTCTGGAGCGA 9543536
Query 8935 TGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGC 8994
|| || || | ||| || || || || || || || || || || || |||||||| |
Sbjct 9543537 GGCTGTGTTGATGATTTCAAAGCCCACTTCTCCTCCAAAAGTACTAGGCTTCCAGTATTC 9543596
Query 8995 CGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGAT 9054
|| || |||||| || ||||||||||||||| ||| ||||| || ||||| || |
Sbjct 9543597 GGGAGAACAGATGGGATTGCCCATGAGCCCTTTCAGGGAGAACGGCGCTCCCAGTTCCAC 9543656
Query 9055 GATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTAGA 9113
||| ||||||| |||||||| || || || |||||||| || | |||| ||| || |
Sbjct 9543657 CATGGTCTCACCAAAGATGGCTCCCGGGCGGGGTTTTTCCACCA-GAAGAGCAGGATACA 9543715
Query 9114 GTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCAC 9173
| || | || |||| ||||| ||||||||||||||||||||||| || || ||||| |
Sbjct 9543716 GCTCCATCGCATCGATATCGCCGTAGAGGGCTTCCAACTCGGCAGCCATGTCTTTCTCCC 9543775
Query 9174 CTACAA 9179
|| |||
Sbjct 9543776 CTGCAA 9543781
Score = 123 bits (136), Expect = 4e-23
Identities = 169/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 9727 ATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGA 9786
|| || || || || || ||||| ||||||| |||| |||||||| || || | ||
Sbjct 9546001 ATGAGCCGGGTCGTCTGGAACAAGCGCTCGTCGTCCCACTCCGGGTGCTCCTGCGTAAGG 9546060
Query 9787 ACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGC 9846
|| || || || | ||||||||| | |||||||| |||||||||||||| | || ||
Sbjct 9546061 ACGTCACACACGCGGTTGTGTTCCCGGAGCCATATCGTGGCGTACATCATCAGCCCGGGG 9546120
Query 9847 ACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCA 9906
|| | || ||||| || | ||| || || || ||||| | ||||| | | || |
Sbjct 9546121 ACCAGGCCGAACACCTCCTGCCCGACGGCGAACCGCAGGTGCTCGGGGATGTGAGGTGGG 9546180
Query 9907 TACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962
|| | ||| | |||| || ||||| || ||||| || |||||||| || |||||
Sbjct 9546181 TAAATCATTTCTGCCTGAGTATCTTTCACAGTGGGAGGGTACATTTCTCCATCAAT 9546236
Score = 104 bits (114), Expect = 3e-17
Identities = 145/198 (73%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 10122 CTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCAT-ATCGGTCCTAAA 10180
||||| ||||| | | || | ||||| ||||||||||| | || || ||| ||||
Sbjct 9547747 CTTACGCCATGGTTTAGTGCTTTGGTGAAGGCCGGTCCTCG-ATGATGGTCAGTCTTAAA 9547805
Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240
|| ||||| || ||||| ||| | || || |||||||||| || ||||| || |||||
Sbjct 9547806 GAACTGGTGAGTGAAGTGCTGCGCAAAGAACGCGAACATCATATTTGTGCCTTGAGGATC 9547865
Query 10241 GGGGATAAA-GGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAGAC 10299
|||||||| || || | | ||||||| |||||||||| | | |||||||| ||
Sbjct 9547866 TGGGATAAATTTTCTTCTCAGCAGAAACTTT-TCCACAATCTCTTTGGAATCGGGAAGCT 9547924
Query 10300 GCGCCTTACCTGATGAGC 10317
| ||||||| | ||||
Sbjct 9547925 CCTTCTTACCTAAAGAGC 9547942
Score = 96.9 bits (106), Expect = 5e-15
Identities = 195/286 (68%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
|||||||| || | | ||||||||| || | ||| | ||||| | | | |||
Sbjct 9544505 CCGGCAATTTGCCGCGAGAACGATTCCACCATACGGGAAAGGCCGTGGTCCAGCATGATA 9544564
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||||||| ||| || | ||| ||| | |||| || || ||
Sbjct 9544565 GAGTTGTTGTAAAGGAACTGCTGGTAGGTGTACACCTGGTCGTGAATATTGAAGGTGTCG 9544624
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| || | |||||| |||||||||| || |||||||| || || || ||||| |||
Sbjct 9544625 GGCAGAAGCGGGTGCCAGTGGTAGAGGGTGTTAAACTCGGCGGCGATGCGATTCTGATAC 9544684
Query 9616 TG-AAAGGC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673
|| ||| || ||| || || | |||||| ||||| | || | |||||| || || |
Sbjct 9544685 TGGAAACGCTGGTTA--AAAAGCAGCTCCGGATCAAACTTCAGTTTGAAGTGATAGCCAC 9544742
Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719
| | ||||| ||||| | | ||| | || ||||||||||| ||
Sbjct 9544743 TCAAGTGCTGAACATAGTCTTCGATCACGATCTTAATGGTTTCACC 9544788
Score = 93.3 bits (102), Expect = 6e-14
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 10386 ATCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGT 10445
|| |||||| || || | || || ||||||||| || ||||| || | ||| ||
Sbjct 9548716 ATTACCTTTGACACCCATTGGGGTTGGGCAGTCAGCTCCCACTGGAGGAAGTGCTCTGGT 9548775
Query 10446 ATAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAG 10505
||||| || | || ||| | ||||||||||| ||||||||||||| | |||||
Sbjct 9548776 GTAATAAGAGATGTTTGAATAGGCTTCCCAGCTTTTGTAGCCATAATTTGCATTGTATGT 9548835
Query 10506 CGGGGGACTGTCAATCATCTCGGACCTGGCT 10536
||| ||||||||||||| | |||||| |||
Sbjct 9548836 CGGTGGACTGTCAATCAAATGGGACCTCGCT 9548866
Score = 87.8 bits (96), Expect = 3e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 10863 CATAAAACCCCGTCCGCGTACAATCGCACCAATAACGATCAAACCCCACCGTCATGCATA 10922
||||| | || |||| |||||| ||||||| || || || || ||||| ||| | || |
Sbjct 9549889 CATAATAGCCGGTCCTCGTACAGTCGCACCTGTACCGGTCGAATCCCACGGTCGTACACA 9549948
Query 10923 CCCCTCGATTCTGGCACGGGTGCGAACAGCAAGGGTTGGCTGCAAT 10968
| ||||||||||| || |||| || ||||| |||||||||| |||
Sbjct 9549949 CACCTCGATTCTGACAGGGGTTGGAGCAGCATGGGTTGGCTGAAAT 9549994
>seq152077
Length=2433926
Score = 109 bits (120), Expect = 8e-19
Identities = 195/285 (68%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953
||||| ||| || |||||||| | ||| || | | || || || |||||||
Sbjct 247597 GGACAGGTCTTGACGTTGGCACAGACGAGCTTGTGCAGCGAGGCCGTCTTGACGATGTTG 247656
Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013
|| || ||||| |||||||||||||| ||||||||| | || ||||||||| |||
Sbjct 247657 AAGCCGGTCTCCCCTCCGAAGGTGCTGGGCTTCCAGTACTCAGGAGAGCAGATGGGGTTA 247716
Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073
||| ||| || || | ||| || || || || | ||||| |||||||| |||||||||
Sbjct 247717 CCCAGGAGACCCTTGAGGGAGAAAGGCGCGCCGATCTCGACCATGCTCTCCCCGAAGATG 247776
Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCG 9133
| ||| | || || | | | || | ||||| || | ||| |||| |||
Sbjct 247777 GAGTTGGGCTGGCACTTCTCCAGCAGCAGCCCCGGGTAGAACTCCAGAGCATCGATGTCA 247836
Query 9134 CCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCTACA 9178
|| || || | | || ||||| || |||||| ||| ||| ||
Sbjct 247837 CCGTACAGCTCCTGCAGTTCGGCTGCCTTCTCCTGCTCGCCTGCA 247881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 721917286823600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |