Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq152282 100 5e-16 >seq152282 Length=256244 Score = 100 bits (110), Expect = 5e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| ||||| ||||| || | || ||| | | |||| ||||| ||||||||| | Sbjct 176479 CTGAAATTCTCCAGACAGGACTCTGCGAGTGTAGATGTTGCTGGTGTATGGTTCGATGGA 176538 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||| || || || ||||| || ||| ||| || |||||||| |||||||||||| Sbjct 176539 CTCGTTATTCCCCAAGATCTGGGCAGTGGAGGCAGTTGGCATGGGGGCCAGGAGCAGGCT 176598 Query 204316 GTTGCGCACACCGTA 204330 ||| | ||||| || Sbjct 176599 GTTCCTGACACCATA 176613 Score = 100 bits (110), Expect = 5e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| ||||| ||||| || | || ||| | | |||| ||||| ||||||||| | Sbjct 178411 CTGAAATTCTCCAGACAGGACTCTGCGAGTGTAGATGTTGCTGGTGTATGGTTCGATGGA 178470 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||| || || || ||||| || ||| ||| || |||||||| |||||||||||| Sbjct 178471 CTCGTTATTCCCCAAGATCTGGGCAGTGGAGGCAGTTGGCATGGGGGCCAGGAGCAGGCT 178530 Query 204316 GTTGCGCACACCGTA 204330 ||| | ||||| || Sbjct 178531 GTTCCTGACACCATA 178545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793165781326240