Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 87.8 1e-12
>seq152203
Length=2432022
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || | ||| ||||| |||||||||| ||| ||| || || || || || || |
Sbjct 2337348 CCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGAT 2337407
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| ||| |||| |||| || || ||| |||| || || | ||||||||||| |||
Sbjct 2337408 AAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 2337467
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCA 39670
| |||||||||||| || || || | || | | |||| ||| || ||||
Sbjct 2337468 ATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGC--TCCA 2337525
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||| || || || || || || || || || || |||||||||||
Sbjct 2337526 CTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| ||||| |||| |||| ||| || || || || || || | || ||| ||
Sbjct 2337588 CGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCA 2337647
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| || || ||| |||| || || | ||||||||||| ||| | ||||||||||
Sbjct 2337648 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2337707
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCACGTCCAAAGTAA 39682
|| || || || | || | | |||| ||| || ||||| |||| || |
Sbjct 2337708 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGC--TCCACTTCCAGGGTGA 2337765
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || || || || || || || || |||||||||||
Sbjct 2337766 TGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| ||||| |||| ||| ||| || || ||||| || || | || ||| ||
Sbjct 2337816 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCA 2337875
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| || || ||| |||| || || | ||||||||||| ||| | ||||||||||
Sbjct 2337876 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2337935
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCACGTCCAAAGTAA 39682
|| || || || | || | | |||| ||| || ||||| |||| || |
Sbjct 2337936 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGC--TCCACTTCCAGGGTGA 2337993
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || || || || || || || || |||||||||||
Sbjct 2337994 TGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| ||||| |||| ||| ||| || || ||||| || || | || ||| ||
Sbjct 2338044 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCA 2338103
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| || || ||| |||| || || | ||||||||||| ||| | ||||||||||
Sbjct 2338104 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2338163
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCACGTCCAAAGTAA 39682
|| || || || | || | | |||| ||| || ||||| |||| || |
Sbjct 2338164 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGC--TCCACTTCCAGGGTGA 2338221
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || || || || || || || || |||||||||||
Sbjct 2338222 TGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
||||| ||||| |||| ||| ||| || || ||||| || || | || ||| ||
Sbjct 2338272 CGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCA 2338331
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| || || ||| |||| || || | ||||||||||| ||| | ||||||||||
Sbjct 2338332 TCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTG 2338391
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCCACGTCCAAAGTAA 39682
|| || || || | || | | |||| ||| || || || || | || |
Sbjct 2338392 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGC--TCTACCTCGAGGGTGA 2338449
Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| |||||||| || || ||||| || || ||||||||
Sbjct 2338450 TGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346522234630682
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |