Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq156569 105 5e-17
seq152203 98.7 8e-15
>seq156569
Length=26576
Score = 105 bits (116), Expect = 5e-17
Identities = 110/143 (77%), Gaps = 1/143 (1%)
Strand=Plus/Minus
Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449
||| || |||| || | || || ||||| || || ||||| || |||||||| || ||
Sbjct 20297 AGTCACCAATGCTGTGGTCACAGTCCCAGCTTACTTCAATGATTCCCAACGTCAGGCCAC 20238
Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509
|||||||||||| ||||| || || ||||| || ||||| |||||||| || |||||
Sbjct 20237 CAAAGATGCTGGAACAATTGCCGGTCTCAATGTGCTCCGTATCATCAATGAGCCAACTGC 20178
Query 550510 TGCTGCACTTGCATATGGACTTG 550532
||||| |||| ||||| ||||
Sbjct 20177 CGCTGCTATTGCCTATGG-CTTG 20156
>seq152203
Length=2432022
Score = 98.7 bits (108), Expect = 8e-15
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312
|||||| || || || | || || ||| ||| || |||||||| |||| || ||
Sbjct 2338265 CCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGT 2338324
Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372
| |||||| || || ||||||||||| || | ||| |||||||| || || || ||
Sbjct 2338325 GCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCC 2338384
Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTG-AGTACATTCGA 563431
|||||| || || || || || || |||||| || ||| || | ||| ||||
Sbjct 2338385 TTCTTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTAC-CTCGA 2338443
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
| || | ||||||||||| | ||||| || ||||| |||||
Sbjct 2338444 GGGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4018710953785460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |