Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 1e-21
seq152438 91.5 2e-13
>seq1
Length=47594283
Score = 118 bits (130), Expect = 1e-21
Identities = 103/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|| |||||||| || | |||||| ||||| || | || |||||||| |||||||| ||
Sbjct 29601952 TCGTCTCTACTGATGAGTTCATTGGAAAAAGTGAGCCCAGGCATTAACCCTCTTTTCTTG 29602011
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||| | ||||||||| ||||||||||| || || || || |||||||| |||
Sbjct 29602012 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCCTCTACCGCTGCAAAGGCT 29602071
Query 37320 ACAAGACG 37327
|||| |||
Sbjct 29602072 ACAACACG 29602079
Score = 95.1 bits (104), Expect = 1e-14
Identities = 79/94 (84%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| ||||||||| | ||||||||||| |||| |||| || ||||||||||| || ||||
Sbjct 29600057 CATTACTCCCATTCTCTGATATTCTCCTACTC-TCTTCTCAAAAAAATTTGTTTTCCCTT 29600115
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| | ||| || ||||||||||| |||||||| ||
Sbjct 29600116 CCAATGAGATGTTTTCCATAAAGTCAAATGGGTT 29600149
>seq152438
Length=1158950
Score = 91.5 bits (100), Expect = 2e-13
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498
|||| | ||||||||||| ||||| ||||| |||||||| ||||||| ||| || |||
Sbjct 117334 ATCTTTGATATAAGTATCTATTAGCAAACTGTACATTTCCGAGTGAACATTCTCGATAAG 117275
Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTC 37528
|||||||| |||||||| || | ||||||
Sbjct 117274 AATCTGAAAGCCATAAAAGCAGCGAGCTTC 117245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590834867790160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |