Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq152438 91.5 2e-13 >seq1 Length=47594283 Score = 118 bits (130), Expect = 1e-21 Identities = 103/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 || |||||||| || | |||||| ||||| || | || |||||||| |||||||| || Sbjct 29601952 TCGTCTCTACTGATGAGTTCATTGGAAAAAGTGAGCCCAGGCATTAACCCTCTTTTCTTG 29602011 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | ||| ||||| | ||||||||| ||||||||||| || || || || |||||||| ||| Sbjct 29602012 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCCTCTACCGCTGCAAAGGCT 29602071 Query 37320 ACAAGACG 37327 |||| ||| Sbjct 29602072 ACAACACG 29602079 Score = 95.1 bits (104), Expect = 1e-14 Identities = 79/94 (84%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| ||||||||| | ||||||||||| |||| |||| || ||||||||||| || |||| Sbjct 29600057 CATTACTCCCATTCTCTGATATTCTCCTACTC-TCTTCTCAAAAAAATTTGTTTTCCCTT 29600115 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | | ||| || ||||||||||| |||||||| || Sbjct 29600116 CCAATGAGATGTTTTCCATAAAGTCAAATGGGTT 29600149 >seq152438 Length=1158950 Score = 91.5 bits (100), Expect = 2e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | ||||||||||| ||||| ||||| |||||||| ||||||| ||| || ||| Sbjct 117334 ATCTTTGATATAAGTATCTATTAGCAAACTGTACATTTCCGAGTGAACATTCTCGATAAG 117275 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTC 37528 |||||||| |||||||| || | |||||| Sbjct 117274 AATCTGAAAGCCATAAAAGCAGCGAGCTTC 117245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590834867790160