Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq152203 122 7e-23 >seq152203 Length=2432022 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || || || | || ||||| || |||||||| || || || ||||| || | Sbjct 2337348 CCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGAT 2337407 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| || ||||| ||||| | ||| ||||| || || Sbjct 2337408 AAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 2337467 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| ||||| || || || || | || | |||||| | |||||| Sbjct 2337468 ATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACT 2337527 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||| || || || ||||| |||||||| Sbjct 2337528 TCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || || |||||||| || || |||||||| || | | || | |||| || Sbjct 2337821 AACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCTTC 2337880 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || ||||| || ||||| ||||| | ||| ||||| || || ||||||||||| || || Sbjct 2337881 CAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTG 2337940 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || || | || | |||||| | |||||||| || |||| || || Sbjct 2337941 GATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTT 2338000 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| || || || ||||| |||||||| Sbjct 2338001 GCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || || |||||||| || || |||||||| || | | || | |||| || Sbjct 2338049 AACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTC 2338108 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || ||||| || ||||| ||||| | ||| ||||| || || ||||||||||| || || Sbjct 2338109 CAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTG 2338168 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || || | || | |||||| | |||||||| || |||| || || Sbjct 2338169 GATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTT 2338228 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||| || || || ||||| |||||||| Sbjct 2338229 GCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || || |||||||| || || |||||||| || | | || | |||| || Sbjct 2338277 AACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTC 2338336 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 || ||||| || ||||| ||||| | ||| ||||| || || ||||||||||| || || Sbjct 2338337 CAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTG 2338396 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| | || | |||||| | || || || || |||| ||||| Sbjct 2338397 GATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTT 2338456 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || || ||||| ||||| |||||||| || Sbjct 2338457 ACCAGTCAAGGTTTTCACAAAAATCTGCATTGT 2338489 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || || || || || ||||| || || || ||||| || | Sbjct 2337576 CCACCTCTGAGGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAT 2337635 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| || ||||| ||||| | ||| ||||| || || Sbjct 2337636 AAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGG 2337695 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| || || || || || || | || | |||||| | |||||| Sbjct 2337696 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACT 2337755 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || |||||||| || || || ||||| |||||||| Sbjct 2337756 TCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395311727634978