Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq189382 197 3e-45 seq66928 134 3e-26 seq152282 95.1 2e-14 >seq189382 Length=4376 Score = 197 bits (218), Expect = 3e-45 Identities = 193/249 (78%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 241385 AGCTGCTGACAGCCTTGGCACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGG 241444 ||| |||| ||||| | | | ||| || ||||| ||||||||| || |||||||| Sbjct 4300 AGCAGCTGGCAGCCGTTGTTGACGTGGTTCATGACCTTCTGTTTGAGCTGCGCCACCTGC 4241 Query 241445 TCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACT 241504 |||||||| | | || || |||||||| || ||||| || | |||||| |||||| Sbjct 4240 TCCCGCAGCAGGCTGGCTGTGTTGGACAGCCCGGCGTTCTCCGTCTTGAGACTCTTCACC 4181 Query 241505 TTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAG 241564 || |||||||| | ||||| || |||||||||||| |||||| |||||||| |||| Sbjct 4180 TTGTCCTCCAGTCTGGCGATCCGCTCCAGTTTGCGCTTGCGGCACTTGGTGGCCGCCAGC 4121 Query 241565 CGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGA 241624 ||||| || |||| || |||||| |||||||||| |||||||||||||| | ||| || Sbjct 4120 CGGTTGCGCAGTCGTTTGCGTTCCACCTTGATGCGCTCCTGGTCCTCCATATTGATGGGC 4061 Query 241625 GACTTGGGT 241633 ||| ||||| Sbjct 4060 GACATGGGT 4052 >seq66928 Length=982 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||| ||||| ||||||||||| ||||| || | | ||||| | ||| Sbjct 685 AGCACCTTCTGCTTGAGCTGGGCCACCTGCTCCCGGAGGAGGTTGGCGGTGGACGCCAGC 744 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| ||| || |||||||||||||||| ||| || ||||| Sbjct 745 TCCGTGTTCTGGCTCTTGAGGCTCTTGACCTTCTCCTCCAGCCGCGAGATCCGCTCCAGC 804 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | ||||||||||| ||| || | ||||||||| || ||||| || || |||||| Sbjct 805 TTCCTTTTGCGGCATTTGGAGGCGGCGATGCGGTTCCGCAGCCTCTTGCGCTCGGCCTTG 864 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 ||||| ||||| ||||||||||| || || Sbjct 865 ATGCGCTCCTGCGTGTCCATGTCGATGGGGGA 896 >seq152282 Length=256244 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||| | ||| || |||||||||||||| ||| |||||| ||||||||||| ||| Sbjct 182822 GTGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGG 182881 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||| || || ||||||||||||||||| || | |||||||| |||| Sbjct 182882 TTGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTCCGTCTGG 182941 Query 213648 GA 213649 || Sbjct 182942 GA 182943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929202174799360