Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq152207 210 3e-49 seq157043 190 2e-43 >seq152207 Length=3261333 Score = 210 bits (232), Expect = 3e-49 Identities = 655/1006 (65%), Gaps = 21/1006 (2%) Strand=Plus/Minus Query 160036 TCAGCGATCTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTT 160095 |||| | | | |||| || | || || || |||||||| || | ||||| ||| Sbjct 3125390 TCAGGGCTTTATGTCTCACGTACTCCTCTAGGCATTGGACTGCATAGGAGTCAATGTCAG 3125331 Query 160096 CGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGG 160155 || || || || || || | ||||| ||| |||| |||||| || |||||| Sbjct 3125330 TATCAAACTTGTTGGCAAAGAAGTGGTGT---TTCCGTAGCATCCAGCTCAAGTCTCCCA 3125274 Query 160156 ACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTT 160215 || ||||| || ||||| || | ||| | || | ||| || || || |||| || | Sbjct 3125273 CTCCAAACACACACACGGAGCGGACGTGAATCCCCTGGCATGGTGGATATGGAGCCCCCT 3125214 Query 160216 TCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGG 160275 | | || || ||||| |||| |||||||||||||||||||| | || ||||| || | Sbjct 3125213 TGGAAACATCTCCTTCAAAGTAATGCCACTTCACAAACCTGGCGACTGCGTGCATATCCG 3125154 Query 160276 AGGTGTCGTA-TTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGG 160334 | ||| || || || | | | || || |||||||| |||| || | || | | Sbjct 3125153 AAACGTCATACTTAGTGC-TGGAAGAAAGCGCCCCGGGAACTTCGGGGATTCTTTGAATG 3125095 Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT---CT 160391 |||||||| | || ||| ||||| ||||| || || |||| ||| || |||| || | Sbjct 3125094 GTGGCCCATAAGTATTCATCGGGACTGTAGGTATCTTTAGCCCACTCGATGAGCTTAAAT 3125035 Query 160392 CCGATTAACCTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCG 160451 | | || ||| ||| || | ||||| |||| |||| ||||| || ||| Sbjct 3125034 ACTTTGCTACTCTCCAGCACAAACT---CTACGTATTTTCTGCTCACCACAAAATAGGCG 3124978 Query 160452 CTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGAC 160511 |||||||| || || || | | ||| || | | ||||| | || |||| | Sbjct 3124977 CTGCCGGAAAAGATAGGAGTTTCGAGAGGTGGGGGCTGTTTGTTGCGTCCCATGTTCTTC 3124918 Query 160512 ACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATG 160571 | || | || | | | | |||||||||||||||| ||||| | ||||| Sbjct 3124917 AGTTTACCGTCGACAATCTCATAATGCTTCTTCCACCTGACTTCCTTGTTCAAAGGCATT 3124858 Query 160572 CGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGG 160631 || || |||| || || |||| || || || | || || || || || | | Sbjct 3124857 TTCTCTGTTTCTAAGCTATTTTCACCCCTTAGGGACTTTAACTTCTCTACAATTTCCAAG 3124798 Query 160632 TTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTC 160691 || ||||| | || || || | || || | || |||| || ||||| || | ||| Sbjct 3124797 TTGGTCTTCATGGGGAAATCCATGCCACAGAGATTGATCAAATATTTCCAGTTTGTACTC 3124738 Query 160692 AGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTAC 160751 || || || ||||||| || | ||||||||||| | |||||| || || ||| Sbjct 3124737 TTTCTGTAGAGATCTTTCATGCAGTTGAGGTCTGCCTGCACTCTGCTCCACGATGCATAC 3124678 Query 160752 ACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACC 160811 || || |||| |||| ||| || | ||||| || | ||| || || | |||||| | Sbjct 3124677 ACAACACTCTCCAGTTGACTTGCAATGAAGACATTGTTGAAGCAAGATGCAATTCCCTTC 3124618 Query 160812 ACCGCCAG--AAAGAACATCTTATCC---GCCTTTCGGTCCACGTGCACGCAATACAGGT 160866 || | ||| ||| | || ||| | ||| ||| || || | ||| || | Sbjct 3124617 ACTG-CAGCTAAAAAGGAT----TCCGGAGATTTTTTGTCAACATGGATGCAGTAATAAT 3124563 Query 160867 TCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCA 160926 |||| || |||||||||| ||| || | | || | ||| || || ||||| | | || Sbjct 3124562 TCTGGGGGGCGTAGATGGACCTCAGGAGTCGGTCAAGCATTTCAATTTTATGGTAAACCA 3124503 Query 160927 CGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACT 160986 | || || ||||| ||||||||||| | ||| || ||| |||| | | |||| Sbjct 3124502 CTATGGAATAGGCAATCGGAAACTCTGCCTCTTCCTTACTAAGGGGTTCCAGAATATACT 3124443 Query 160987 TTCGCGTCTTGATAAAATAATCACAATCCCGCGTCATGTTGATATA 161032 | ||| ||||| | ||| | | ||||| ||||| || || || Sbjct 3124442 TGCGCTTCTTGGTGAAAGAGGCGCAATCTTTGGTCATATTTATGTA 3124397 >seq157043 Length=30550 Score = 190 bits (210), Expect = 2e-43 Identities = 592/910 (65%), Gaps = 15/910 (2%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 |||| ||||| | ||| ||||| || |||| ||| |||| || | ||| || | Sbjct 22623 TGTGGCGCAGGTATTCCTCCAGGCACTGGAGCGCGTTGTCGTCCACCTGGGGGTCAAACT 22564 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 | || || | ||| || ||| ||||| || |||||||| | |||||||| |||| | | Sbjct 22563 TGTTGGCCAGCAGGTGATGA---TTCTGGAGCATCCAGTGGAGGTCTCCGGCCCCGTAGA 22507 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 |||||||| || ||| || |||| || | ||| | || || || | |||| Sbjct 22506 TGCAGACGGCCCGCTGGTGGGTTCCCGTGCAGGGGGCGTAGGGTGCCCCCTTGCCGACGT 22447 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | ||||||| | | |||||| || | || ||| || || | || ||||||||||| || Sbjct 22446 CTCCTTCGTGGCCCATCCACTTGACCAGCCGGGCGATGGCGTTCAGGTCGGAGGTGTGGT 22387 Query 160285 ATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344 | ||| | | || | || || || | | |||| ||||| ||||||||||| | Sbjct 22386 ACTTGGAGTGGTGAGGGATGGAGCCCGGCATCCAAGGCACCCGCTGCAGGGTGGCCCAGA 22327 Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG- 160403 |||| ||||| |||||||||||||| || | ||| || || | | || | | | Sbjct 22326 GGTGCTCGTCCGGGCTGTACGTGTCATTGGTCCACTCGATCAGTTTTCGGGCCCGCGGGT 22267 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 || || || | || ||| || ||| | || || || ||| | |||| ||| Sbjct 22266 TCTCGAAG-AGATGCTGGACGAAGCTCCTGCAGGCCACGAAATAGGCGTTTCCGGTGAAC 22208 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | || || | | | || ||| | | ||| | ||| Sbjct 22207 ATGGGCACGTTGTCGGGTGGGGGGCCCTTCTCCATCTTCATCTGGAACAGCGTGTTCTTC 22148 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGT--GCGGTGGCATGCGTTCCGTCT 160581 ||| | || || | ||||||| | | | |||| || | || | |||| || Sbjct 22147 GCCACCATGTAGCGGTGTTTCCACCGGCTCCTTTTGTAGGCCGAGGGCACC--TCCGACT 22090 Query 160582 CTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGA 160641 | | ||||| |||| || |||||| | || ||||| ||| ||||||| Sbjct 22089 CCATGCTGTTCTTCCCGTTCAGAACTTTCAGAGACCGCACCATCTCAGCGTTGGTCTTGA 22030 Query 160642 GCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TTTCGCGCTCAGGTCGT 160698 || ||||| || ||||| ||||| | ||||||||| || ||| | | Sbjct 22029 TGGGGAAGTCCGTCCCGCAGGTGTTTAAGAGGTACTTCCAAGGCACCGGACTCCG---GA 21973 Query 160699 GCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGT 160758 ||||||| |||||| || | ||| || ||||| ||| |||||||||||| || ||| Sbjct 21972 GCAGGTCTTCCATGCAGTTGAGATCCGCTTGCACTCGGGACCAGGAAGCGTAGACCACGG 21913 Query 160759 TCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCA 160818 | |||||| ||||||| |||||||| ||| ||||| ||| || || ||| Sbjct 21912 CTACGAGTTTAGTGGCCACGAAGACGTTCGGGAAGCACGAGGTGATCGCCCTGACTGCCT 21853 Query 160819 GAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGT 160878 || || | ||| ||| | ||| ||||| |||| ||||||||| |||| Sbjct 21852 CCTTAAAAGGCTCGGGAGACTTCTCGTCAATGTGGACGCAGTACACGTTCTGAGGGGCGT 21793 Query 160879 AGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGG 160938 ||||||||||||| | || || || |||| ||||| || |||||||| ||||| |||| Sbjct 21792 AGATGGCCCTGAGGAGTCTTTCAAAGTTCTCGATCTTCTGGTGGATCACCATAGAATAGG 21733 Query 160939 CTATCGGAAA 160948 | || ||||| Sbjct 21732 CGATGGGAAA 21723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575775040853040