Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq152207 210 3e-49
seq157043 190 2e-43
>seq152207
Length=3261333
Score = 210 bits (232), Expect = 3e-49
Identities = 655/1006 (65%), Gaps = 21/1006 (2%)
Strand=Plus/Minus
Query 160036 TCAGCGATCTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTT 160095
|||| | | | |||| || | || || || |||||||| || | ||||| |||
Sbjct 3125390 TCAGGGCTTTATGTCTCACGTACTCCTCTAGGCATTGGACTGCATAGGAGTCAATGTCAG 3125331
Query 160096 CGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGG 160155
|| || || || || || | ||||| ||| |||| |||||| || ||||||
Sbjct 3125330 TATCAAACTTGTTGGCAAAGAAGTGGTGT---TTCCGTAGCATCCAGCTCAAGTCTCCCA 3125274
Query 160156 ACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTT 160215
|| ||||| || ||||| || | ||| | || | ||| || || || |||| || |
Sbjct 3125273 CTCCAAACACACACACGGAGCGGACGTGAATCCCCTGGCATGGTGGATATGGAGCCCCCT 3125214
Query 160216 TCGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGG 160275
| | || || ||||| |||| |||||||||||||||||||| | || ||||| || |
Sbjct 3125213 TGGAAACATCTCCTTCAAAGTAATGCCACTTCACAAACCTGGCGACTGCGTGCATATCCG 3125154
Query 160276 AGGTGTCGTA-TTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGG 160334
| ||| || || || | | | || || |||||||| |||| || | || | |
Sbjct 3125153 AAACGTCATACTTAGTGC-TGGAAGAAAGCGCCCCGGGAACTTCGGGGATTCTTTGAATG 3125095
Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT---CT 160391
|||||||| | || ||| ||||| ||||| || || |||| ||| || |||| || |
Sbjct 3125094 GTGGCCCATAAGTATTCATCGGGACTGTAGGTATCTTTAGCCCACTCGATGAGCTTAAAT 3125035
Query 160392 CCGATTAACCTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCG 160451
| | || ||| ||| || | ||||| |||| |||| ||||| || |||
Sbjct 3125034 ACTTTGCTACTCTCCAGCACAAACT---CTACGTATTTTCTGCTCACCACAAAATAGGCG 3124978
Query 160452 CTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGAC 160511
|||||||| || || || | | ||| || | | ||||| | || |||| |
Sbjct 3124977 CTGCCGGAAAAGATAGGAGTTTCGAGAGGTGGGGGCTGTTTGTTGCGTCCCATGTTCTTC 3124918
Query 160512 ACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATG 160571
| || | || | | | | |||||||||||||||| ||||| | |||||
Sbjct 3124917 AGTTTACCGTCGACAATCTCATAATGCTTCTTCCACCTGACTTCCTTGTTCAAAGGCATT 3124858
Query 160572 CGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGG 160631
|| || |||| || || |||| || || || | || || || || || | |
Sbjct 3124857 TTCTCTGTTTCTAAGCTATTTTCACCCCTTAGGGACTTTAACTTCTCTACAATTTCCAAG 3124798
Query 160632 TTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTC 160691
|| ||||| | || || || | || || | || |||| || ||||| || | |||
Sbjct 3124797 TTGGTCTTCATGGGGAAATCCATGCCACAGAGATTGATCAAATATTTCCAGTTTGTACTC 3124738
Query 160692 AGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTAC 160751
|| || || ||||||| || | ||||||||||| | |||||| || || |||
Sbjct 3124737 TTTCTGTAGAGATCTTTCATGCAGTTGAGGTCTGCCTGCACTCTGCTCCACGATGCATAC 3124678
Query 160752 ACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACC 160811
|| || |||| |||| ||| || | ||||| || | ||| || || | |||||| |
Sbjct 3124677 ACAACACTCTCCAGTTGACTTGCAATGAAGACATTGTTGAAGCAAGATGCAATTCCCTTC 3124618
Query 160812 ACCGCCAG--AAAGAACATCTTATCC---GCCTTTCGGTCCACGTGCACGCAATACAGGT 160866
|| | ||| ||| | || ||| | ||| ||| || || | ||| || |
Sbjct 3124617 ACTG-CAGCTAAAAAGGAT----TCCGGAGATTTTTTGTCAACATGGATGCAGTAATAAT 3124563
Query 160867 TCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCA 160926
|||| || |||||||||| ||| || | | || | ||| || || ||||| | | ||
Sbjct 3124562 TCTGGGGGGCGTAGATGGACCTCAGGAGTCGGTCAAGCATTTCAATTTTATGGTAAACCA 3124503
Query 160927 CGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACT 160986
| || || ||||| ||||||||||| | ||| || ||| |||| | | ||||
Sbjct 3124502 CTATGGAATAGGCAATCGGAAACTCTGCCTCTTCCTTACTAAGGGGTTCCAGAATATACT 3124443
Query 160987 TTCGCGTCTTGATAAAATAATCACAATCCCGCGTCATGTTGATATA 161032
| ||| ||||| | ||| | | ||||| ||||| || || ||
Sbjct 3124442 TGCGCTTCTTGGTGAAAGAGGCGCAATCTTTGGTCATATTTATGTA 3124397
>seq157043
Length=30550
Score = 190 bits (210), Expect = 2e-43
Identities = 592/910 (65%), Gaps = 15/910 (2%)
Strand=Plus/Minus
Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104
|||| ||||| | ||| ||||| || |||| ||| |||| || | ||| || |
Sbjct 22623 TGTGGCGCAGGTATTCCTCCAGGCACTGGAGCGCGTTGTCGTCCACCTGGGGGTCAAACT 22564
Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164
| || || | ||| || ||| ||||| || |||||||| | |||||||| |||| | |
Sbjct 22563 TGTTGGCCAGCAGGTGATGA---TTCTGGAGCATCCAGTGGAGGTCTCCGGCCCCGTAGA 22507
Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224
|||||||| || ||| || |||| || | ||| | || || || | ||||
Sbjct 22506 TGCAGACGGCCCGCTGGTGGGTTCCCGTGCAGGGGGCGTAGGGTGCCCCCTTGCCGACGT 22447
Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284
| ||||||| | | |||||| || | || ||| || || | || ||||||||||| ||
Sbjct 22446 CTCCTTCGTGGCCCATCCACTTGACCAGCCGGGCGATGGCGTTCAGGTCGGAGGTGTGGT 22387
Query 160285 ATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344
| ||| | | || | || || || | | |||| ||||| ||||||||||| |
Sbjct 22386 ACTTGGAGTGGTGAGGGATGGAGCCCGGCATCCAAGGCACCCGCTGCAGGGTGGCCCAGA 22327
Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG- 160403
|||| ||||| |||||||||||||| || | ||| || || | | || | | |
Sbjct 22326 GGTGCTCGTCCGGGCTGTACGTGTCATTGGTCCACTCGATCAGTTTTCGGGCCCGCGGGT 22267
Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463
|| || || | || ||| || ||| | || || || ||| | |||| |||
Sbjct 22266 TCTCGAAG-AGATGCTGGACGAAGCTCCTGCAGGCCACGAAATAGGCGTTTCCGGTGAAC 22208
Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523
|| || | | || || | | | || ||| | | ||| | |||
Sbjct 22207 ATGGGCACGTTGTCGGGTGGGGGGCCCTTCTCCATCTTCATCTGGAACAGCGTGTTCTTC 22148
Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGT--GCGGTGGCATGCGTTCCGTCT 160581
||| | || || | ||||||| | | | |||| || | || | |||| ||
Sbjct 22147 GCCACCATGTAGCGGTGTTTCCACCGGCTCCTTTTGTAGGCCGAGGGCACC--TCCGACT 22090
Query 160582 CTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGA 160641
| | ||||| |||| || |||||| | || ||||| ||| |||||||
Sbjct 22089 CCATGCTGTTCTTCCCGTTCAGAACTTTCAGAGACCGCACCATCTCAGCGTTGGTCTTGA 22030
Query 160642 GCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCA---TTTCGCGCTCAGGTCGT 160698
|| ||||| || ||||| ||||| | ||||||||| || ||| | |
Sbjct 22029 TGGGGAAGTCCGTCCCGCAGGTGTTTAAGAGGTACTTCCAAGGCACCGGACTCCG---GA 21973
Query 160699 GCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGT 160758
||||||| |||||| || | ||| || ||||| ||| |||||||||||| || |||
Sbjct 21972 GCAGGTCTTCCATGCAGTTGAGATCCGCTTGCACTCGGGACCAGGAAGCGTAGACCACGG 21913
Query 160759 TCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCA 160818
| |||||| ||||||| |||||||| ||| ||||| ||| || || |||
Sbjct 21912 CTACGAGTTTAGTGGCCACGAAGACGTTCGGGAAGCACGAGGTGATCGCCCTGACTGCCT 21853
Query 160819 GAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGT 160878
|| || | ||| ||| | ||| ||||| |||| ||||||||| ||||
Sbjct 21852 CCTTAAAAGGCTCGGGAGACTTCTCGTCAATGTGGACGCAGTACACGTTCTGAGGGGCGT 21793
Query 160879 AGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGG 160938
||||||||||||| | || || || |||| ||||| || |||||||| ||||| ||||
Sbjct 21792 AGATGGCCCTGAGGAGTCTTTCAAAGTTCTCGATCTTCTGGTGGATCACCATAGAATAGG 21733
Query 160939 CTATCGGAAA 160948
| || |||||
Sbjct 21732 CGATGGGAAA 21723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 575775040853040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |