Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq152438 95.1 1e-14 seq152282 93.3 5e-14 >seq152438 Length=1158950 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/124 (78%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| |||||| |||||| || |||||||||||||| || || ||| || || | |||| Sbjct 125034 TTGCCTTTGCGGCTGTGGAAGGAATCTTCTTCTCCGGATCCTT-TGCTGCCATATTTTGG 125092 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| ||||||| ||||| || || ||||| |||||||| || |||||| Sbjct 125093 CTGAAGAAGAGGGGTCTTATGCCTGGATTAACTTTCTCTAATGAACTCATAAGCCGAGAC 125152 Query 65206 GAGG 65209 |||| Sbjct 125153 GAGG 125156 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/124 (78%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| |||||| |||||| || |||||||||||||| || || ||| || || | |||| Sbjct 127963 TTGCCTTTGCGGCTGTGGAAGGAATCTTCTTCTCCGGATCCTT-TGCTGCCATATTTTGG 128021 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| ||||||| ||||| || || ||||| |||||||| || |||||| Sbjct 128022 CTGAAGAAGAGGGGTCTTATGCCTGGATTA-ATTTCTCTAATGAACTCATAAGCCGAGAC 128080 Query 65206 GAGG 65209 |||| Sbjct 128081 GAGG 128084 >seq152282 Length=256244 Score = 93.3 bits (102), Expect = 5e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 |||| ||||||||||| ||||| || || ||||| |||||||| ||||||| ||||| Sbjct 182945 AATCCCAGACGGAGACCGGAACGCCGTACATGCTCTACAAGGACACTTGTAATCGGAAGA 182886 Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013 | ||||| |||| |||| || ||||| | || || ||||||||||| | |||| Sbjct 182885 GCAACCAGCAGAACCTGGGGACCATCAAATGTAGCAACCTGTGCACGGAAATCGTCGAGT 182826 Query 76014 ACAC 76017 |||| Sbjct 182825 ACAC 182822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595077027603520