Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq152438 95.1 1e-14
seq152282 93.3 5e-14
>seq152438
Length=1158950
Score = 95.1 bits (104), Expect = 1e-14
Identities = 97/124 (78%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145
|||| |||||| |||||| || |||||||||||||| || || ||| || || | ||||
Sbjct 125034 TTGCCTTTGCGGCTGTGGAAGGAATCTTCTTCTCCGGATCCTT-TGCTGCCATATTTTGG 125092
Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205
|||||||| ||||||| ||||| || || ||||| |||||||| || ||||||
Sbjct 125093 CTGAAGAAGAGGGGTCTTATGCCTGGATTAACTTTCTCTAATGAACTCATAAGCCGAGAC 125152
Query 65206 GAGG 65209
||||
Sbjct 125153 GAGG 125156
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/124 (78%), Gaps = 3/124 (2%)
Strand=Plus/Plus
Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145
|||| |||||| |||||| || |||||||||||||| || || ||| || || | ||||
Sbjct 127963 TTGCCTTTGCGGCTGTGGAAGGAATCTTCTTCTCCGGATCCTT-TGCTGCCATATTTTGG 128021
Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205
|||||||| ||||||| ||||| || || ||||| |||||||| || ||||||
Sbjct 128022 CTGAAGAAGAGGGGTCTTATGCCTGGATTA-ATTTCTCTAATGAACTCATAAGCCGAGAC 128080
Query 65206 GAGG 65209
||||
Sbjct 128081 GAGG 128084
>seq152282
Length=256244
Score = 93.3 bits (102), Expect = 5e-14
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953
|||| ||||||||||| ||||| || || ||||| |||||||| ||||||| |||||
Sbjct 182945 AATCCCAGACGGAGACCGGAACGCCGTACATGCTCTACAAGGACACTTGTAATCGGAAGA 182886
Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013
| ||||| |||| |||| || ||||| | || || ||||||||||| | ||||
Sbjct 182885 GCAACCAGCAGAACCTGGGGACCATCAAATGTAGCAACCTGTGCACGGAAATCGTCGAGT 182826
Query 76014 ACAC 76017
||||
Sbjct 182825 ACAC 182822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595077027603520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |