Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq152203 111 3e-19 >seq152203 Length=2432022 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| || | || || |||| |||| |||| || || ||||| ||||| Sbjct 2338257 ATACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCA 2338316 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | || ||||||||||| || |||||||| ||||| || Sbjct 2338317 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2338376 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || || |||| || | ||| ||| || || | ||| Sbjct 2338377 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCT 2338436 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || |||||||| || | ||||| ||||| || |||||| Sbjct 2338437 ACCTCGAGGGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2338487 Score = 104 bits (114), Expect = 4e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185 |||| | ||| || ||||| || || |||| ||||| |||| || || || || | Sbjct 2337340 TTTAAACACCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGT 2337399 Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245 |||| ||||| || | ||| || | || ||||||||||| || |||||||| |||| Sbjct 2337400 AGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGAT 2337459 Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305 | || || || |||||||| ||||| || |||| || | || ||| || || | Sbjct 2337460 CCGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGG 2337519 Query 193306 ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||| || || || || || || || | || || ||||| || ||||| Sbjct 2337520 GCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| || | || || |||| |||| |||| || || |||||| ||||| Sbjct 2337801 ATACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCA 2337860 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | || ||||||||||| || |||||||| ||||| || Sbjct 2337861 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2337920 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || || |||| || | || ||| || || | ||| Sbjct 2337921 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2337980 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || | || || ||||| || ||||| Sbjct 2337981 ACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| || | || || |||| |||| |||| || || ||||| ||||| Sbjct 2338029 ATACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCA 2338088 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | || ||||||||||| || |||||||| ||||| || Sbjct 2338089 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2338148 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || || |||| || | || ||| || || | ||| Sbjct 2338149 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2338208 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || | || || ||||| || ||||| Sbjct 2338209 ACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || || |||| |||| || | || || || || ||||| Sbjct 2337573 ATACCACCTCTGAGGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCA 2337632 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 ||||| || | ||| || | || ||||||||||| || |||||||| ||||| || Sbjct 2337633 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2337692 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || || |||| || | || ||| || || | ||| Sbjct 2337693 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2337752 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || | || || ||||| || ||||| Sbjct 2337753 ACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897403532165280