Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 111 3e-19
>seq152203
Length=2432022
Score = 111 bits (122), Expect = 3e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| || | || || |||| |||| |||| || || ||||| |||||
Sbjct 2338257 ATACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCA 2338316
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | ||| || | || ||||||||||| || |||||||| ||||| ||
Sbjct 2338317 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2338376
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || || |||| || | ||| ||| || || | |||
Sbjct 2338377 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCT 2338436
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
|| || || || || |||||||| || | ||||| ||||| || ||||||
Sbjct 2338437 ACCTCGAGGGTGATGGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATT 2338487
Score = 104 bits (114), Expect = 4e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185
|||| | ||| || ||||| || || |||| ||||| |||| || || || || |
Sbjct 2337340 TTTAAACACCTCCCCTCAAGCGCAGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGT 2337399
Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245
|||| ||||| || | ||| || | || ||||||||||| || |||||||| ||||
Sbjct 2337400 AGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGAT 2337459
Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305
| || || || |||||||| ||||| || |||| || | || ||| || || |
Sbjct 2337460 CCGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGG 2337519
Query 193306 ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||| ||||| || || || || || || || | || || ||||| || |||||
Sbjct 2337520 GCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574
Score = 100 bits (110), Expect = 5e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| || | || || |||| |||| |||| || || |||||| |||||
Sbjct 2337801 ATACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCA 2337860
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | ||| || | || ||||||||||| || |||||||| ||||| ||
Sbjct 2337861 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2337920
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || || |||| || | || ||| || || | |||
Sbjct 2337921 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2337980
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || | || || ||||| || |||||
Sbjct 2337981 ACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| || | || || |||| |||| |||| || || ||||| |||||
Sbjct 2338029 ATACCACCCCTGAGGCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCA 2338088
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | ||| || | || ||||||||||| || |||||||| ||||| ||
Sbjct 2338089 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2338148
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || || |||| || | || ||| || || | |||
Sbjct 2338149 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2338208
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || | || || ||||| || |||||
Sbjct 2338209 ACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | || || |||| |||| || | || || || || |||||
Sbjct 2337573 ATACCACCTCTGAGGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCA 2337632
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
||||| || | ||| || | || ||||||||||| || |||||||| ||||| ||
Sbjct 2337633 GATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGG 2337692
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || |||||||| || || || |||| || | || ||| || || | |||
Sbjct 2337693 GGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 2337752
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || | || || ||||| || |||||
Sbjct 2337753 ACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897403532165280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |