Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq160084 91.5 4e-13 >seq160084 Length=22186 Score = 91.5 bits (100), Expect = 4e-13 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTC- 302678 || || || || || || || || || | || || ||||| || |||||||| | ||| Sbjct 19638 GTCTTGACGGCGGTGTCGATGAGCCCCTCGCGCCCGCCCATGGCGTGGAAGAAGAACTCG 19579 Query 302679 -TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAAT 302737 | |||| ||||| | | ||||| |||| ||||| || || ||||||| | Sbjct 19578 GTGGGGGTC--AGCCCGGCCAAGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGCCCGT 19521 Query 302738 CGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTC 302797 |||| |||| | ||||| ||||| |||| || || ||||| | ||||| ||||| | Sbjct 19520 AGTCGTCCTTGATGAAGTGGGGCAGCGTCCGGTGCTTGAAGCCGAAGGGGATCCGCTTGC 19461 Query 302798 CATCAACGTTCTGCTGTCCCA 302818 | || ||||||||||| |||| Sbjct 19460 CCTCCACGTTCTGCTGCCCCA 19440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468043163319898