Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 91.5 1e-13
>seq152203
Length=2432022
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| |||||||| ||||| || || || |||||||| ||| |||| ||| | |
Sbjct 2338487 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGAGCCCAG 2338428
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || || ||||| || ||||||||| | ||| ||||||
Sbjct 2338427 TGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCA 2338368
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||||| | || | ||| || || |||||||| || | || | | ||||||||
Sbjct 2338367 GCAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAA 2338308
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|| || ||||| ||||| ||||| ||||
Sbjct 2338307 TATCCAGAAGGAATCTACTCTGCACTTGGT 2338278
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| || || || || ||||| ||||| ||| | ||| |||| | |
Sbjct 2338030 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337971
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | || || ||||| || ||||||||| | ||| |||||||
Sbjct 2337970 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337911
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||| | || | ||| || || |||||||| || | || | | ||||||||
Sbjct 2337910 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2337851
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764
||||| ||||| ||||| ||||| ||||
Sbjct 2337850 ATTCAGAAGGAATCTACTCTGCACTTGGT 2337822
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| || || || || ||||| ||||| ||| | ||| |||| | |
Sbjct 2337574 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337515
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | || || ||||| || ||||||||| | ||| |||||||
Sbjct 2337514 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 2337455
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||| | || | ||| || || |||||||| || | || | | |||||||||
Sbjct 2337454 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337395
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781
|| || ||||| ||||| |||| |||| || | || ||||||
Sbjct 2337394 ATCCAGAAGGAATCTACTCTGCATTTGGTCCTGCGCTT--GAGGGG 2337351
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| || || || || ||||| ||||| ||| | ||| |||| | |
Sbjct 2337802 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337743
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | || || ||||| || ||||||||| | ||| |||||||
Sbjct 2337742 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337683
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||| | || | ||| || || |||||||| || | || | | |||||||||
Sbjct 2337682 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337623
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|| || ||||| || || ||||| ||||
Sbjct 2337622 ATCCAGAAGGAATCCACTCTGCACTTGGT 2337594
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| || || || || ||||| ||||| ||| | ||| |||| | |
Sbjct 2338258 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2338199
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | || || ||||| || ||||||||| | ||| |||||||
Sbjct 2338198 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2338139
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|||||| | || | ||| || || |||||||| || | || | | ||||||||
Sbjct 2338138 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2338079
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|| || ||||| ||||| ||||| ||||
Sbjct 2338078 ATCCAGAAGGAATCTACTCTGCACTTGGT 2338050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397903789158106
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