Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 95.1 3e-14
>seq152203
Length=2432022
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||| |||||||||| ||||
Sbjct 2337571 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGAC 2337512
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| ||||| |||||||| || ||||| ||
Sbjct 2337511 ACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAGCAG 2337452
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| |||||||||||| |||||||||| | || || | || |||||| ||
Sbjct 2337451 AGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAACATC 2337392
Query 206353 CAGAAAGAGTCTACTCTTCA 206372
||||| || |||||||| ||
Sbjct 2337391 CAGAAGGAATCTACTCTGCA 2337372
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||| |||||||||| ||||
Sbjct 2338255 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGAC 2338196
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||| || ||||| ||
Sbjct 2338195 ACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGCAG 2338136
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| |||||||||||| |||||||||| | || || | || ||||| ||
Sbjct 2338135 AGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAATATC 2338076
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
||||| || |||||||| ||| | ||| ||
Sbjct 2338075 CAGAAGGAATCTACTCTGCACTTGGTTCTG 2338046
Score = 87.8 bits (96), Expect = 4e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||| |||||||||| ||||
Sbjct 2337799 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGAC 2337740
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||| || ||||| ||
Sbjct 2337739 ACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGCAG 2337680
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| |||||||||||| |||||||||| | || || | || |||||| ||
Sbjct 2337679 AGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAACATC 2337620
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| || || ||||| |||
Sbjct 2337619 CAGAAGGAATCCACTCTGCAC 2337599
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || || || ||||| |||||||||| ||||
Sbjct 2338027 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGTGAC 2337968
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||| || ||||| ||
Sbjct 2337967 ACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGCAG 2337908
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| |||||||||||| |||||||||| | || || | || ||||| |
Sbjct 2337907 AGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAATATT 2337848
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
||||| || |||||||| ||| | ||| ||
Sbjct 2337847 CAGAAGGAATCTACTCTGCACTTGGTTCTG 2337818
Score = 86.0 bits (94), Expect = 1e-11
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||||| | || || ||||| ||||| | || || || ||||
Sbjct 2338483 CAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGAGCCCAGTGAC 2338424
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || |||||||| || ||||| ||
Sbjct 2338423 ACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGCAG 2338364
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| |||||||||||| |||||||||| | || || | || ||||| ||
Sbjct 2338363 AGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAATATC 2338304
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
||||| || |||||||| ||| | ||| ||
Sbjct 2338303 CAGAAGGAATCTACTCTGCACTTGGTTCTG 2338274
Score = 84.2 bits (92), Expect = 5e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819
|| ||| | ||| |||||||| || ||||||| ||| ||||||| || || | |||||
Sbjct 2338046 CAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATC 2338105
Query 204820 TTCCAGCTGCTTTCCGGCGAAGAT 204843
|||||||||||||||||| |||||
Sbjct 2338106 TTCCAGCTGCTTTCCGGCAAAGAT 2338129
Score = 84.2 bits (92), Expect = 5e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819
|| ||| | ||| |||||||| || ||||||| ||| ||||||| || || | |||||
Sbjct 2338274 CAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATC 2338333
Query 204820 TTCCAGCTGCTTTCCGGCGAAGAT 204843
|||||||||||||||||| |||||
Sbjct 2338334 TTCCAGCTGCTTTCCGGCAAAGAT 2338357
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178790052319834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |