Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq152282 98.7 9e-16
seq152203 87.8 2e-12
seq152076 82.4 7e-11
>seq152282
Length=256244
Score = 98.7 bits (108), Expect = 9e-16
Identities = 89/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562
|||||| |||||||| | |||||||||||| ||||| ||| |||| || ||||| |
Sbjct 182823 TGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGGT 182882
Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614
|||| |||||||| || | ||| ||| ||||||||||||| ||||||||
Sbjct 182883 TGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTC 182934
>seq152203
Length=2432022
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131908 GCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGA 131967
||||| |||||| || | | || || || || || |||||||| | ||| |||
Sbjct 2338271 GCGCAGAACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCC 2338330
Query 131968 ATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTT 132027
|||||| ||||| || |||| | |||| | | ||| ||||| || || |||||||||||
Sbjct 2338331 ATCTTCCAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTT 2338390
Query 132028 ATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087
|| || || || | | || | || || | ||||| || |||| || |
Sbjct 2338391 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGAT 2338450
Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||||||||| ||||| | |||||||||||
Sbjct 2338451 GGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486
>seq152076
Length=2538501
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || ||||||||||||||| | || || |||||| ||||| || |||| |
Sbjct 778798 GACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCA 778857
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| || || ||||| ||||| || || || ||||| ||||
Sbjct 778858 AAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACG 778917
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | ||||| || || | || | || || |||||||| || ||
Sbjct 778918 TTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTC 778977
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 778978 ACGAAGATCTGCATG 778992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475418754523440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |