Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq152305 122 1e-22 seq152124 116 4e-21 >seq152305 Length=463424 Score = 122 bits (134), Expect = 1e-22 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | || || | ||| || ||||| | ||||| ||||| ||||| || Sbjct 101672 CTTCAGGCCCGTGATATGTGCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAA 101731 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || || ||||||||||| || || ||||||||||||||||| |||||||| || | Sbjct 101732 GGGCACTCCGAGGCCCATGTCTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATT 101791 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||| || |||||||| || ||||| || ||||| ||||| Sbjct 101792 CAACACATAGAACTGGCAGAGAGCATGGCAAGGGGGCAGAGCCAT 101836 >seq152124 Length=6934412 Score = 116 bits (128), Expect = 4e-21 Identities = 120/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| ||||||||| | | ||||| | ||||| | | |||| || ||||||| Sbjct 3899716 GTACTCCCTGGTGTTTATAGTGGGGCTGGTGGGCAACGTCGTGGTAGCGCTGATCCTCAT 3899775 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || |||||||||||||| ||| |||||||||||| ||| ||||| |||| || ||| Sbjct 3899776 TAAATACAAGAGGCTCAGAATCGTGACCAACATCTACCTCCTCAACTTGGCGTTTTCTGA 3899835 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCAC 8766 |||| | |||||||||| || |||||||||||| Sbjct 3899836 TTTGCTTTTCCTTTTCACCCTTCCATTTTGGATTCAC 3899872 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || ||||||||| | | || | | |||||| | |||| | || ||||| | Sbjct 3878455 GTATTCCCTGGTGTTTATAGTGGGTGTGGTGGGCAATTTCATGGTCGTGCTGATCCTCGT 3878396 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || ||||||||||||| | |||||||||||||| ||| ||| | |||| || ||| Sbjct 3878395 TAAATACAAGAGGCTCATAACCATGACCAACATCTACCTCCTCAGCTTGGCGTTTTCTGA 3878336 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 |||| | |||||||| | || ||||||||||||| Sbjct 3878335 TTTGCTTTTTCTTTTCACCTTTCCATTTTGGATTCACT 3878298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582028156785600