Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq152305 122 1e-22
seq152124 116 4e-21
>seq152305
Length=463424
Score = 122 bits (134), Expect = 1e-22
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | || || | ||| || ||||| | ||||| ||||| ||||| ||
Sbjct 101672 CTTCAGGCCCGTGATATGTGCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAA 101731
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
||| || || ||||||||||| || || ||||||||||||||||| |||||||| || |
Sbjct 101732 GGGCACTCCGAGGCCCATGTCTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATT 101791
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
||| || |||||||| || ||||| || ||||| |||||
Sbjct 101792 CAACACATAGAACTGGCAGAGAGCATGGCAAGGGGGCAGAGCCAT 101836
>seq152124
Length=6934412
Score = 116 bits (128), Expect = 4e-21
Identities = 120/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| ||||||||| | | ||||| | ||||| | | |||| || |||||||
Sbjct 3899716 GTACTCCCTGGTGTTTATAGTGGGGCTGGTGGGCAACGTCGTGGTAGCGCTGATCCTCAT 3899775
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
|| |||||||||||||| ||| |||||||||||| ||| ||||| |||| || |||
Sbjct 3899776 TAAATACAAGAGGCTCAGAATCGTGACCAACATCTACCTCCTCAACTTGGCGTTTTCTGA 3899835
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCAC 8766
|||| | |||||||||| || ||||||||||||
Sbjct 3899836 TTTGCTTTTCCTTTTCACCCTTCCATTTTGGATTCAC 3899872
Score = 91.5 bits (100), Expect = 2e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
||| || ||||||||| | | || | | |||||| | |||| | || ||||| |
Sbjct 3878455 GTATTCCCTGGTGTTTATAGTGGGTGTGGTGGGCAATTTCATGGTCGTGCTGATCCTCGT 3878396
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
|| ||||||||||||| | |||||||||||||| ||| ||| | |||| || |||
Sbjct 3878395 TAAATACAAGAGGCTCATAACCATGACCAACATCTACCTCCTCAGCTTGGCGTTTTCTGA 3878336
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||| | |||||||| | || |||||||||||||
Sbjct 3878335 TTTGCTTTTTCTTTTCACCTTTCCATTTTGGATTCACT 3878298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582028156785600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |