Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq152203 131 2e-25 seq152076 116 3e-21 >seq152203 Length=2432022 Score = 131 bits (144), Expect = 2e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||||| || || ||||| || | ||||| ||| | || ||| Sbjct 2338278 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2338337 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| ||||| | |||||| |||| || | || || |||||| | Sbjct 2338338 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2338397 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | | ||||| || | || ||||| | ||||| |||||| Sbjct 2338398 ATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTTA 2338457 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCGCACACACA 35752 || ||||| ||||||||||| ||||||||| | || || ||||| Sbjct 2338458 CCAGTCAAGGTTTTCACAAAAATCTGCATTGTCTGTTCAAACACA 2338502 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||| | ||| ||||| || |||||||| || | ||||| ||| | || ||| Sbjct 2337366 ACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCTTCC 2337425 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| ||||| | |||||| |||| || | || || ||||| | Sbjct 2337426 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCTTGG 2337485 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | ||||| || | ||||| |||| ||||| || || Sbjct 2337486 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 2337545 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| || |||||||| |||||||| Sbjct 2337546 CCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||||| ||||| ||||| || | ||||| ||| | || ||| Sbjct 2337822 ACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2337881 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| ||||| | |||||| |||| || | || || |||||| | Sbjct 2337882 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2337941 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | ||||| || | ||||| |||| ||||| || || Sbjct 2337942 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 2338001 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| || |||||||| |||||||| Sbjct 2338002 CCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | ||||| ||| | || ||||||||||| || ||||| Sbjct 2337612 TCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCTTCCAGCTGCTTTCCGGCAAAG 2337671 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| | |||||| |||| || | || || |||||| |||||| ||| | | Sbjct 2337672 ATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGGATCTTGGCCTTGACGTTC 2337731 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | ||||| |||| ||||| || || || ||||| || |||||| Sbjct 2337732 TCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACA 2337791 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2337792 AAGATCTGCAT 2337802 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||||| || || ||||| || | ||||| ||| | || ||| Sbjct 2338050 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2338109 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || ||||| ||||| | |||||| |||| || | || || |||||| | Sbjct 2338110 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2338169 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | | | | ||||| || | ||||| |||| ||||| || || Sbjct 2338170 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTG 2338229 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| || |||||||| |||||||| Sbjct 2338230 CCGGTCAAGGTCTTCACAAAGATCTGCAT 2338258 >seq152076 Length=2538501 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || | || || |||||||| || ||||| Sbjct 778116 CTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 778175 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||| | || |||||||||| ||| || ||||| | Sbjct 778176 GATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTT 778235 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || ||||||| || ||||| Sbjct 778236 CTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 778295 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 778296 GAAGATCTGCAT 778307 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || | || || |||||||| || ||||| Sbjct 778572 CTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 778631 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | || | || ||| |||||| ||| || ||||| | | Sbjct 778632 GATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTCACATT 778691 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || ||||||| || ||||| Sbjct 778692 CTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 778751 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 778752 GAAGATCTGCAT 778763 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || | || || |||||||| || ||||| Sbjct 778800 CTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAA 778859 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||| | || |||||||||| ||| || ||||| | Sbjct 778860 GATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTT 778919 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || || |||| || ||||| Sbjct 778920 CTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCAC 778979 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 778980 GAAGATCTGCAT 778991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449665748222320