Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq152438 95.1 2e-14
seq152282 93.3 5e-14
>seq152438
Length=1158950
Score = 95.1 bits (104), Expect = 2e-14
Identities = 97/124 (78%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
|||| |||||| || |||||||| ||||| || || ||||| ||||||| |||||
Sbjct 125156 CCTCGTCTCGGCTTATGAGTTCATTAGAGAAAGTTAATCCAGGCATAAGACCCCTCTTCT 125097
Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
||| |||| | || || ||| || || |||||||||||||| || |||||| ||||||
Sbjct 125096 TCAGCCAAAATATGGCAGCA-AAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAG 125038
Query 122797 GCAA 122800
||||
Sbjct 125037 GCAA 125034
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/124 (78%), Gaps = 3/124 (2%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737
|||| |||||| || |||||||| ||||| || || ||||| ||||||| |||||
Sbjct 128084 CCTCGTCTCGGCTTATGAGTTCATTAGAGAAAT-TAATCCAGGCATAAGACCCCTCTTCT 128026
Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796
||| |||| | || || ||| || || |||||||||||||| || |||||| ||||||
Sbjct 128025 TCAGCCAAAATATGGCAGCA-AAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAG 127967
Query 122797 GCAA 122800
||||
Sbjct 127966 GCAA 127963
>seq152282
Length=256244
Score = 93.3 bits (102), Expect = 5e-14
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337
|||||||| | ||||| || || | |||| || || || ||||||| |||| |||
Sbjct 182822 GTGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGG 182881
Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397
|| |||||| || || | ||||||||||||||||| ||||| || |||||||||||
Sbjct 182882 TTGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTCCGTCTGG 182941
Query 111398 GATT 111401
||||
Sbjct 182942 GATT 182945
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 626460711038400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |