Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq152438 91.5 2e-13
seq152282 86.0 8e-12
>seq152438
Length=1158950
Score = 91.5 bits (100), Expect = 2e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| ||| ||||||||||| ||||| | || ||||| ||||||| |||||
Sbjct 125156 CCTCGTCTCGGCTTATGAGTTCATTAGAGAAAGTTAATCCAGGCATAAGACCCCTCTTCT 125097
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154
||| ||| || || ||| ||| || || ||||||||||| || |||||| ||| || |
Sbjct 125096 TCAGCCAAAATATGGCAGCAAAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAGG 125037
Query 130155 CAA 130157
|||
Sbjct 125036 CAA 125034
Score = 87.8 bits (96), Expect = 2e-12
Identities = 94/123 (76%), Gaps = 1/123 (1%)
Strand=Plus/Minus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| ||| ||||||||||| ||||| | || ||||| ||||||| |||||
Sbjct 128084 CCTCGTCTCGGCTTATGAGTTCATTAGAGAAATTAAT-CCAGGCATAAGACCCCTCTTCT 128026
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154
||| ||| || || ||| ||| || || ||||||||||| || |||||| ||| || |
Sbjct 128025 TCAGCCAAAATATGGCAGCAAAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAGG 127966
Query 130155 CAA 130157
|||
Sbjct 127965 CAA 127963
>seq152282
Length=256244
Score = 86.0 bits (94), Expect = 8e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811
|||||||| | ||||||||||||| ||| || || ||||| |||| ||||| ||
Sbjct 182822 GTGTACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGG 182881
Query 118812 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 118871
|| ||| ||||| | |||||||| |||||||| ||||| || |||||||| |||
Sbjct 182882 TTGCTCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTCCGTCTGG 182941
Query 118872 GA 118873
||
Sbjct 182942 GA 182943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 616887921512240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |