Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq154373 95.1 1e-14
seq152438 95.1 1e-14
>seq154373
Length=45528
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||||||||| |||| |||||| | ||| ||||| || ||||| || ||||||||
Sbjct 19986 GTGAAGATGTAACGGGGGCTGGCAGAATCTTTGCCCCCGTGGAGCCGGGTGCCAAACTGA 20045
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
|| ||||| | |||||||| ||||||| |||||| || || || |||||||| | |
Sbjct 20046 CCGATGGGCTGTAAGAGGTTGACGTTGTTGCTGCCCACAAAGTTTTGTGCCAAATTAATA 20105
Query 152149 ATCGT 152153
|| ||
Sbjct 20106 ATGGT 20110
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| |||||||| | ||| |||| ||| ||||| || || || || || || ||
Sbjct 19986 GTGAAGATGTAACGGGGGCTGGCAGAATCTTTGCCCCCGTGGAGCCGGGTGCCAAACTGA 20045
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| | |||| |||||||| | ||||||| ||||||||||||||| ||||| || | |
Sbjct 20046 CCGATGGGCTGTAAGAGGTTGACGTTGTTGCTGCCCACAAAGTTTTGTGCCAAATTAATA 20105
Query 117425 ATCGT 117429
|| ||
Sbjct 20106 ATGGT 20110
>seq152438
Length=1158950
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
|| |||| |||||| | |||||| || || | | ||||||||||| || | |||||||
Sbjct 125154 TCGTCTCGGCTTATGAGTTCATTAGAGAAAGTTAATCCAGGCATAAGACCCCTCTTCTTC 125095
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| |||||| |||||| ||||| || ||||||||| ||||| ||| |||||||||
Sbjct 125094 AGCCAAAATATGGCAGCAAAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAGGCA 125035
Query 74892 AC 74893
||
Sbjct 125034 AC 125033
Score = 91.5 bits (100), Expect = 2e-13
Identities = 94/122 (77%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
|| |||| |||||| | |||||| || || || ||||||||||| || | |||||||
Sbjct 128082 TCGTCTCGGCTTATGAGTTCATTAGAGAAATTAAT-CCAGGCATAAGACCCCTCTTCTTC 128024
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
| |||||| |||||| ||||| || ||||||||| ||||| ||| |||||||||
Sbjct 128023 AGCCAAAATATGGCAGCAAAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAGGCA 127964
Query 74892 AC 74893
||
Sbjct 127963 AC 127962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545846906609200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |