Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq152076 167 3e-36 seq171586 163 3e-35 seq152203 140 4e-28 seq105056 120 3e-22 seq152282 105 8e-18 seq154373 82.4 9e-11 >seq152076 Length=2538501 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 778535 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 778476 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||||||||| |||||||||||||| || ||||| |||||| Sbjct 778475 GACACAATTGAGAACGTGAAGGCTAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 778416 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 778415 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 778356 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| |||| || | ||||| Sbjct 778355 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778309 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 778307 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 778248 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||||||||| |||||||||||||| || ||||| |||||| Sbjct 778247 GACACAATTGAGAACGTGAAGGCTAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 778188 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 778187 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 778128 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||||| || || ||| |||| || | ||||| Sbjct 778127 ATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778081 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| || || |||||||| || || || ||||| ||| | | Sbjct 779220 AATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 779161 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| || ||||||| ||||| ||||||||||| || || ||||| ||||| Sbjct 779160 TGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCTGACCA 779101 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| ||| || || | ||||| || Sbjct 779100 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCTGACTACAA 779041 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | || || | ||||| Sbjct 779040 CATCCAGAAGGAGTCCACTCTGCACCTTGTCCTACGCCTGAGGGGTGG 778993 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 778991 ATGCAGATCTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 778932 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| ||||| |||||||||||||| || ||||| |||||| Sbjct 778931 GACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 778872 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 778871 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 778812 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| |||||||| || || ||| |||| || | ||||| Sbjct 778811 ATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 778765 >seq171586 Length=8203 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| || || |||||||| || || || ||||| ||| | | Sbjct 2883 AATGCAGATTTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 2824 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| || ||||||| ||||| ||||||||||| || || ||||| ||||| Sbjct 2823 TGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCTGACCA 2764 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | || || ||||| || ||||| || || |||| ||| || || | ||||| || Sbjct 2763 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCCGACTACAA 2704 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| |||| || | ||||| Sbjct 2703 CATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 2656 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 2198 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 2139 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| ||||| |||||||||||||| || ||||| |||||| Sbjct 2138 GACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 2079 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 2078 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 2019 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| |||| || | ||||| Sbjct 2018 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 1972 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 2426 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 2367 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| ||||| |||||||||||||| || ||||| |||||| Sbjct 2366 GACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 2307 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 2306 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 2247 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| |||| || | ||||| Sbjct 2246 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 2200 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || || |||||||| || || || ||||| ||| | || Sbjct 1970 ATGCAGATCTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 1911 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||||| ||||| |||||||||||||| || || || |||||| Sbjct 1910 GACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 1851 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || ||||| || ||||| || || |||| || || || | ||||| || Sbjct 1850 CAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAAC 1791 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| |||| || | ||||| Sbjct 1790 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 1744 >seq152203 Length=2432022 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || || || || ||| | || Sbjct 2337802 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337743 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || |||||||| || || || || || || ||| Sbjct 2337742 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337683 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || || |||| || ||| || | ||||| || Sbjct 2337682 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337623 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| || | ||| |||| || | ||||| Sbjct 2337622 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCCTCAGAGGTGG 2337576 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || || || || ||| | || Sbjct 2338258 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2338199 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || |||||||| || || || || || || ||| Sbjct 2338198 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2338139 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || || |||| || ||| || | ||||| ||| Sbjct 2338138 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2338079 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||||| || | || |||| || | ||||| Sbjct 2338078 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGG 2338032 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || || || || ||| | || Sbjct 2337574 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337515 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || || ||||| || || || || || || ||| Sbjct 2337514 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 2337455 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || || |||| || ||| || | ||||| || Sbjct 2337454 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337395 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCG 27620 |||| |||||||| ||||| ||| | ||| |||| Sbjct 2337394 ATCCAGAAGGAATCTACTCTGCATTTGGTCCTGCG 2337360 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || || || || ||| | || Sbjct 2338030 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337971 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || |||||||| || || || || || || ||| Sbjct 2337970 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337911 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || || |||| || ||| || | ||||| ||| Sbjct 2337910 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2337851 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| ||||| || | || |||| || | ||||| Sbjct 2337850 ATTCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGG 2337804 >seq105056 Length=1238 Score = 120 bits (132), Expect = 3e-22 Identities = 128/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| | |||| || ||||||| ||||| ||||||||||| || || ||||| |||| Sbjct 743 GTGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCTGACC 684 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| || ||||| || || |||| ||| || || | ||||| | Sbjct 683 AGCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCCGACTACA 624 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| |||||||| || || ||| |||| || | ||||| Sbjct 623 ACATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGG 575 >seq152282 Length=256244 Score = 105 bits (116), Expect = 8e-18 Identities = 121/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||||||||||||||||| || | | || || || |||||||| | |||||| Sbjct 182826 ACTCGACGATTTCCGTGCACAGGTTGCTACATTTGATGGTCCCCAGGTTCTGCTGGTTGC 182885 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| || |||| |||||||||| ||||||||| || |||||||| ||| || | Sbjct 182886 TCTTCCGATTACAAGTGTCCTTGTAGAGCATGTACGGCGTTCCGGTCTCCGTCTGGGATT 182945 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCG 81110 | |||||||| ||| | || | ||||| ||||| ||||| Sbjct 182946 CTATGATGGCGTACCACAGCTGCTGGGCCTTCACCACTTTGCG 182988 >seq154373 Length=45528 Score = 82.4 bits (90), Expect = 9e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCC- 32183 |||||| | || | || || |||||||| || || ||| | ||| | | |||| Sbjct 20110 ACCATTATTAATTTGGCACAAAACTTTGTGGGCAGCAACAACGTCAACCTCTTACAGCCC 20051 Query 32184 ATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACAT 32243 ||| || |||||||| ||||||||| ||| ||||| ||| |||| ||| |||||||||| Sbjct 20050 ATC-GGTCAGTTTGGCACCCGGCTCCACGGGGGCAAAGATTCTGCCAGCCCCCGTTACAT 19992 Query 32244 CTTCACC 32250 ||||||| Sbjct 19991 CTTCACC 19985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568883526152480