Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq157043 215 7e-51
seq152207 93.3 6e-14
>seq157043
Length=30550
Score = 215 bits (238), Expect = 7e-51
Identities = 612/932 (66%), Gaps = 19/932 (2%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
||||||||| ||| || | | |||||||||||||| || || ||||||||||| |||
Sbjct 21699 CCCCTGAGCAAGGAGGAAGAGAACTTTCCCATCGCCTATTCTATGGTGATCCACCAGAAG 21758
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||||| || || | ||||| ||||||||||||||||| |||||| | |||||||||
Sbjct 21759 ATCGAGAACTTTGAAAGACTCCTCAGGGCCATCTACGCCCCTCAGAACGTGTACTGCGTC 21818
Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850
||| | ||| ||||| ||| || | || ||| ||| ||| || ||||
Sbjct 21819 CACATTGACGAGAAGTCTCCCGAGCCTTTTAAGGAGGCAGTCAGGGCGATCACCTCGTGC 21878
Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910
||||| ||||| | ||||| || | |||||| |||| |||||| ||
Sbjct 21879 TTCCCGAACGTCTTCGTGGCCACTAAACTCGTAGCCGTGGTCTACGCTTCCTGGTCCCGA 21938
Query 13911 GTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTAC 13970
||||| || || |||| ||||||| |||||| | || || |||| ||||
Sbjct 21939 GTGCAAGCGGATCTCAACTGCATGGAAGACCTGCTCCGGAGTCCGGTGCCTTGGAAGTAC 21998
Query 13971 CTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCG 14030
|| | ||| ||||||| ||||||||| ||||||||||| ||||| |||||| |
Sbjct 21999 CTCTTAAACACCTGCGGGACGGACTTCCCCATCAAGACCAACGCTGAGATGGTGCGGTCT 22058
Query 14031 CTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCC---AACCACAAG 14087
||||| | ||| ||| |||||| | ||||| |||| ||||| | ||||
Sbjct 22059 CTGAAAGTTCTGAACGGGAAGAACAGCATGGAGTCGGAGG---TGCCCTCGGCCTACAAA 22115
Query 14088 CTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC 14147
| ||| | | | || ||||||| | | | || || | |
Sbjct 22116 AGGAGCCGGTGGAAACACCGCTACATGGTGGCGA---AGAACACGCTGTTCCAGATGAAG 22172
Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207
| | | |||| ||| || || || | ||||| || | |||||||| || || | |
Sbjct 22173 ATGGAGAAGGGCCCCCCACCCGACAACGTGCCCATGTTCACCGGAAACGCCTATTTCGTG 22232
Query 14208 GTCACCCGGGAGTTCGTGGA-CTTCGTCCTCAAGGACGAGCCGGTGGCCC---TGCTCAT 14263
| | | || ||||| | | || || || || || ||| ||||| || ||
Sbjct 22233 GCCTGCAGGAGCTTCGTCCAGCATC-TCTTCGAGAAC---CCGCGGGCCCGAAAACTGAT 22288
Query 14264 GCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAAT 14323
| ||| | | |||||||||||||| ||||||||||| ||||||||| ||||| | |
Sbjct 22289 CGAGTGGACCAATGACACGTACAGCCCGGACGAGCACCTCTGGGCCACCCTGCAGCGGGT 22348
Query 14324 GTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGC 14383
| ||| ||| || ||||| ||| ||||||| ||||||| ||| || ||
Sbjct 22349 GCCTTGGATGCCGGGCTCCATCCCTCACCACTCCAAGTACCACACCTCCGACCTGAACGC 22408
Query 14384 CAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTA 14443
|| | | || | ||||||||| | |||| || || || || ||||| | ||
Sbjct 22409 CATCGCCCGGCTGGTCAAGTGGATGGGCCACGAAGGAGACGTCGGCAAGGGGGCACCCTA 22468
Query 14444 CCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAA 14503
| | || ||| || | |||| | ||| ||||||||| |||| |||| ||| | |
Sbjct 22469 CGCCCCCTGCACGGGAACCCACCAGCGGGCCGTCTGCATCTACGGGGCCGGAGACCTCCA 22528
Query 14504 GTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGT 14562
||| || || | | |||||| | ||||||||||| ||| | || ||||||
Sbjct 22529 CTGGATGCTCCAGAAT-CATCACCTGCTGGCCAACAAGTTTGACCCCCAGGTGGACGACA 22587
Query 14563 TCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594
||| | | || ||||| || || |||||
Sbjct 22588 ACGCGCTCCAGTGCCTGGAGGAATACCTGCGC 22619
>seq152207
Length=3261333
Score = 93.3 bits (102), Expect = 6e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
||||| || |||||||| |||||||| || ||||| || || ||| | |||| ||
Sbjct 3124457 CCCCTTAGTAAGGAAGAGGCAGAGTTTCCGATTGCCTATTCCATAGTGGTTTACCATAAA 3124516
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
|| || ||| | || || ||||||||| ||||||||||||| ||||| |||||| ||
Sbjct 3124517 ATTGAAATGCTTGACCGACTCCTGAGGTCCATCTACGCCCCCCAGAATTATTACTGCATC 3124576
Query 13791 CACGTGGAC 13799
|| || |||
Sbjct 3124577 CATGTTGAC 3124585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657091083927040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |