Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq157043 215 7e-51 seq152207 93.3 6e-14 >seq157043 Length=30550 Score = 215 bits (238), Expect = 7e-51 Identities = 612/932 (66%), Gaps = 19/932 (2%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 ||||||||| ||| || | | |||||||||||||| || || ||||||||||| ||| Sbjct 21699 CCCCTGAGCAAGGAGGAAGAGAACTTTCCCATCGCCTATTCTATGGTGATCCACCAGAAG 21758 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||||||| || || | ||||| ||||||||||||||||| |||||| | ||||||||| Sbjct 21759 ATCGAGAACTTTGAAAGACTCCTCAGGGCCATCTACGCCCCTCAGAACGTGTACTGCGTC 21818 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGC 13850 ||| | ||| ||||| ||| || | || ||| ||| ||| || |||| Sbjct 21819 CACATTGACGAGAAGTCTCCCGAGCCTTTTAAGGAGGCAGTCAGGGCGATCACCTCGTGC 21878 Query 13851 TTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGC 13910 ||||| ||||| | ||||| || | |||||| |||| |||||| || Sbjct 21879 TTCCCGAACGTCTTCGTGGCCACTAAACTCGTAGCCGTGGTCTACGCTTCCTGGTCCCGA 21938 Query 13911 GTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTAC 13970 ||||| || || |||| ||||||| |||||| | || || |||| |||| Sbjct 21939 GTGCAAGCGGATCTCAACTGCATGGAAGACCTGCTCCGGAGTCCGGTGCCTTGGAAGTAC 21998 Query 13971 CTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCG 14030 || | ||| ||||||| ||||||||| ||||||||||| ||||| |||||| | Sbjct 21999 CTCTTAAACACCTGCGGGACGGACTTCCCCATCAAGACCAACGCTGAGATGGTGCGGTCT 22058 Query 14031 CTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCC---AACCACAAG 14087 ||||| | ||| ||| |||||| | ||||| |||| ||||| | |||| Sbjct 22059 CTGAAAGTTCTGAACGGGAAGAACAGCATGGAGTCGGAGG---TGCCCTCGGCCTACAAA 22115 Query 14088 CTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACACCGGC 14147 | ||| | | | || ||||||| | | | || || | | Sbjct 22116 AGGAGCCGGTGGAAACACCGCTACATGGTGGCGA---AGAACACGCTGTTCCAGATGAAG 22172 Query 14148 AGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCG 14207 | | | |||| ||| || || || | ||||| || | |||||||| || || | | Sbjct 22173 ATGGAGAAGGGCCCCCCACCCGACAACGTGCCCATGTTCACCGGAAACGCCTATTTCGTG 22232 Query 14208 GTCACCCGGGAGTTCGTGGA-CTTCGTCCTCAAGGACGAGCCGGTGGCCC---TGCTCAT 14263 | | | || ||||| | | || || || || || ||| ||||| || || Sbjct 22233 GCCTGCAGGAGCTTCGTCCAGCATC-TCTTCGAGAAC---CCGCGGGCCCGAAAACTGAT 22288 Query 14264 GCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAAT 14323 | ||| | | |||||||||||||| ||||||||||| ||||||||| ||||| | | Sbjct 22289 CGAGTGGACCAATGACACGTACAGCCCGGACGAGCACCTCTGGGCCACCCTGCAGCGGGT 22348 Query 14324 GTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGC 14383 | ||| ||| || ||||| ||| ||||||| ||||||| ||| || || Sbjct 22349 GCCTTGGATGCCGGGCTCCATCCCTCACCACTCCAAGTACCACACCTCCGACCTGAACGC 22408 Query 14384 CAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTA 14443 || | | || | ||||||||| | |||| || || || || ||||| | || Sbjct 22409 CATCGCCCGGCTGGTCAAGTGGATGGGCCACGAAGGAGACGTCGGCAAGGGGGCACCCTA 22468 Query 14444 CCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAA 14503 | | || ||| || | |||| | ||| ||||||||| |||| |||| ||| | | Sbjct 22469 CGCCCCCTGCACGGGAACCCACCAGCGGGCCGTCTGCATCTACGGGGCCGGAGACCTCCA 22528 Query 14504 GTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGT 14562 ||| || || | | |||||| | ||||||||||| ||| | || |||||| Sbjct 22529 CTGGATGCTCCAGAAT-CATCACCTGCTGGCCAACAAGTTTGACCCCCAGGTGGACGACA 22587 Query 14563 TCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594 ||| | | || ||||| || || ||||| Sbjct 22588 ACGCGCTCCAGTGCCTGGAGGAATACCTGCGC 22619 >seq152207 Length=3261333 Score = 93.3 bits (102), Expect = 6e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 ||||| || |||||||| |||||||| || ||||| || || ||| | |||| || Sbjct 3124457 CCCCTTAGTAAGGAAGAGGCAGAGTTTCCGATTGCCTATTCCATAGTGGTTTACCATAAA 3124516 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 || || ||| | || || ||||||||| ||||||||||||| ||||| |||||| || Sbjct 3124517 ATTGAAATGCTTGACCGACTCCTGAGGTCCATCTACGCCCCCCAGAATTATTACTGCATC 3124576 Query 13791 CACGTGGAC 13799 || || ||| Sbjct 3124577 CATGTTGAC 3124585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657091083927040