Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq152305 125 6e-24
seq1 87.8 1e-12
>seq152305
Length=463424
Score = 125 bits (138), Expect = 6e-24
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001
|| || |||| || || ||||| || ||||| | ||||| |||||||||||||||||
Sbjct 101676 AGGCCCGTGATATGTGCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAAGGGC 101735
Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061
|| ||||| |||||||| || || |||||||| ||||| || |||||||| || | |
Sbjct 101736 ACTCCGAGGCCCATGTCTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATTCAAC 101795
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105
|| || ||||| || | || ||||| || || |||||||| ||
Sbjct 101796 ACATAGAACTGGCAGAGAGCATGGCAAGGGGGCAGAGCCATCAG 101839
Score = 107 bits (118), Expect = 2e-18
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 30222 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281
|||| || |||| || || || ||||| ||||||||||| || || || ||||||| ||
Sbjct 105877 TCATCTCTTTGTATTCGGCACCAAAATGTCTCCACTGGAAGCCATAAACTGGTCCCAAGT 105936
Query 30282 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341
|||| || || ||| ||||| ||| |||| ||||| | || || ||||| |
Sbjct 105937 CTCCTTCCTCTCTGGAGGTAAAGCCATGCTTATCCAGGAAGTCCCGAGACCCATTGGCAT 105996
Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|||||||| | || || || ||||||| ||||||| |||||||| ||
Sbjct 105997 CCCAGATCCTCACTCCTTTTGCAGAGAGTTCTTTGGCATTTGTGGAGCC 106045
>seq1
Length=47594283
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460
|| || || |||||||| |||| || || |||||| ||| ||||| | | || || ||
Sbjct 12103591 TTTAGTTCTCTGCTGAGCACTATATTAATTCTGTCTTTCAAAGGTCGACTTTTCTCAGGA 12103532
Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508
||||||||||| ||||| ||||||||||||||| || || || |||
Sbjct 12103531 ATGGAGAACCAGGTCTTCTTACCCATTATCACCAGATTTTGTTTACCT 12103484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405319255806168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |