Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 134 1e-26
seq152076 111 1e-19
>seq152203
Length=2432022
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||||||| | || || || |||||||| ||
Sbjct 2337574 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337515
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| || || ||||||||||||||||| || || |||||
Sbjct 2337514 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAG 2337455
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || ||||||| | ||| | || || ||||||
Sbjct 2337454 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337395
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||| || || | |||||||| |||| ||| |||| ||
Sbjct 2337394 ATCCAGAAGGAATCTACTCTGCATTTGGTCCTGCGCTTGAGGGGAGG 2337348
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||||||| | || || || |||||||| ||
Sbjct 2338030 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337971
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| || || || |||||||||||||| || || |||||
Sbjct 2337970 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337911
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || ||||||| | ||| | || || |||||
Sbjct 2337910 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2337851
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| ||||| || || | || |||||| |||| | ||||||| ||
Sbjct 2337850 ATTCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGGTAT 2337801
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||||||| | || || || |||||||| ||
Sbjct 2338258 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2338199
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| || || || |||||||||||||| || || |||||
Sbjct 2338198 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2338139
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || ||||||| | ||| | || || |||||
Sbjct 2338138 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2338079
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || |||||| |||| | ||||||| ||
Sbjct 2338078 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGGTAT 2338029
Score = 118 bits (130), Expect = 9e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || ||||||||||| | || || || |||||||| ||
Sbjct 2337802 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGAGCCCAGT 2337743
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| || || || |||||||||||||| || || |||||
Sbjct 2337742 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2337683
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || ||||||| | ||| | || || ||||||
Sbjct 2337682 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAC 2337623
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202
|| || ||||| || || | || ||||| ||||
Sbjct 2337622 ATCCAGAAGGAATCCACTCTGCACTTGGTCCTGCG 2337588
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| ||||| |||| || || | || || || || || || ||
Sbjct 2338486 ATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGAGCCCAGT 2338427
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| ||||| || || || |||||||||||||| || || |||||
Sbjct 2338426 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAG 2338367
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||| || || ||||||| | ||| | || || |||||
Sbjct 2338366 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAAT 2338307
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || |||||| |||| | ||||||| ||
Sbjct 2338306 ATCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAGGGGTGGTAT 2338257
>seq152076
Length=2538501
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||| |||||| | || || || || || || ||
Sbjct 778764 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778705
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| || || ||||| || |||||||| ||||| || ||||| ||
Sbjct 778704 TGACACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAGGGCATCCCCCCCGACCA 778645
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | |||||||| || | ||||| | || | ||||| |||||
Sbjct 778644 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778585
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | || | || |||| || ||||||||||
Sbjct 778584 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGGCAT 778534
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||| |||||| | || || || || || || ||
Sbjct 778992 CATGCAGATCTTCGTGAAGACACTGACTGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778933
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct 778932 TGACACAATTGAGAACGTGAAGGCCAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 778873
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | |||||||| || | ||||| | || | ||||| |||||
Sbjct 778872 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778813
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | || | || |||| || ||||||||||
Sbjct 778812 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGGCAT 778762
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || ||||| |||||| | || || || || || || ||
Sbjct 778308 CATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGAGCCCAG 778249
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||||| || || ||||| || ||||| || ||||| || ||||| ||
Sbjct 778248 TGACACAATTGAGAACGTGAAGGCTAAAATCCAGGACAAGGAGGGCATCCCTCCCGACCA 778189
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | |||||||| || | ||||| | || | ||||| |||||
Sbjct 778188 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAA 778129
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|||||| |||||||| || | || | || |||| || ||||||||
Sbjct 778128 CATTCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGCCTGAGGGGTGGC 778080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433860662306522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |