Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq152305 136 4e-27
>seq152305
Length=463424
Score = 136 bits (150), Expect = 4e-27
Identities = 129/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
|| ||| |||||||| || ||||| | | |||||| || ||||| || ||||| || |
Sbjct 101684 GATATGTGCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAAGGGCACTCCGAG 101743
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
||||||||||| |||| || || |||||||| || ||||| |||||| || |||||
Sbjct 101744 GCCCATGTCTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATTCAACACATAGAA 101803
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|||||||| | ||||| ||||| || ||||||||||||| |||
Sbjct 101804 CTGGCAGAGAGCATGGCAAGGGGGCAGAGCCATCAGAGGGATATC 101848
Score = 136 bits (150), Expect = 4e-27
Identities = 129/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||| ||||||||||||| || ||||| ||||| | |||||||| ||||| || ||||
Sbjct 101848 GATATCCCTCTGATGGCTCTGCCCCCTTGCCATGCTCTCTGCCAGTTCTATGTGTTGAAT 101789
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||| || |||||||| || || |||| ||||||||||| | || ||||| ||
Sbjct 101788 GGTGAGCTCTCTTGCCAGCTGTACCAGAGATCAGGAGACATGGGCCTCGGAGTGCCCTTT 101729
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
||||| || |||||| | | ||||| || |||||||| ||| ||
Sbjct 101728 AACATCGCCAGTTACTCATTACTCACATATATGATCGCACATATC 101684
Score = 98.7 bits (108), Expect = 9e-16
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || || ||||| |||||||||||||| || || || || |||||||| || |||||
Sbjct 105888 TATTCGGCACCAAAATGTCTCCACTGGAAGCCATAAACTGGTCCCAAGTCTCCTTCCTCT 105947
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| || | || || |||| ||||| ||||| |||||||| | || ||||||||| ||
Sbjct 105948 CTGGAGGTAAAGCCATGCTTATCCAGGAAGTCCCGAGACCCATTGGCATCCCAGATCCTC 106007
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052
|| || | ||||| || |||| || ||||
Sbjct 106008 ACTCCTTTTGCAGAGAGTTCTTTGGCATTTGTGG 106041
Score = 98.7 bits (108), Expect = 9e-16
Identities = 114/154 (74%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352
|||| || |||| || ||||| | || |||| ||||||||| || | |||||||
Sbjct 106041 CCACAAATGCCAAAGAACTCTCTGCAAAAGGAGTGAGGATCTGGGATGCCAATGGGTCTC 105982
Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412
| ||||| ||||| |||| || || | || | ||||| || |||||||| || || |
Sbjct 105981 GGGACTTCCTGGATAAGCATGGCTTTACCTCCAGAGAGGAAGGAGACTTGGGACCAGTTT 105922
Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
| || |||||||||||||| ||||| || || ||
Sbjct 105921 ATGGCTTCCAGTGGAGACATTTTGGTGCCGAATA 105888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447140881094880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |