Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq152305 136 4e-27 >seq152305 Length=463424 Score = 136 bits (150), Expect = 4e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 || ||| |||||||| || ||||| | | |||||| || ||||| || ||||| || | Sbjct 101684 GATATGTGCGATCATATATGTGAGTAATGAGTAACTGGCGATGTTAAAGGGCACTCCGAG 101743 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||||| |||| || || |||||||| || ||||| |||||| || ||||| Sbjct 101744 GCCCATGTCTCCTGATCTCTGGTACAGCTGGCAAGAGAGCTCACCATTCAACACATAGAA 101803 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 |||||||| | ||||| ||||| || ||||||||||||| ||| Sbjct 101804 CTGGCAGAGAGCATGGCAAGGGGGCAGAGCCATCAGAGGGATATC 101848 Score = 136 bits (150), Expect = 4e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||| ||||||||||||| || ||||| ||||| | |||||||| ||||| || |||| Sbjct 101848 GATATCCCTCTGATGGCTCTGCCCCCTTGCCATGCTCTCTGCCAGTTCTATGTGTTGAAT 101789 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||| || |||||||| || || |||| ||||||||||| | || ||||| || Sbjct 101788 GGTGAGCTCTCTTGCCAGCTGTACCAGAGATCAGGAGACATGGGCCTCGGAGTGCCCTTT 101729 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 ||||| || |||||| | | ||||| || |||||||| ||| || Sbjct 101728 AACATCGCCAGTTACTCATTACTCACATATATGATCGCACATATC 101684 Score = 98.7 bits (108), Expect = 9e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || ||||| |||||||||||||| || || || || |||||||| || ||||| Sbjct 105888 TATTCGGCACCAAAATGTCTCCACTGGAAGCCATAAACTGGTCCCAAGTCTCCTTCCTCT 105947 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | || | || || |||| ||||| ||||| |||||||| | || ||||||||| || Sbjct 105948 CTGGAGGTAAAGCCATGCTTATCCAGGAAGTCCCGAGACCCATTGGCATCCCAGATCCTC 106007 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGG 7052 || || | ||||| || |||| || |||| Sbjct 106008 ACTCCTTTTGCAGAGAGTTCTTTGGCATTTGTGG 106041 Score = 98.7 bits (108), Expect = 9e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34293 CCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTC 34352 |||| || |||| || ||||| | || |||| ||||||||| || | ||||||| Sbjct 106041 CCACAAATGCCAAAGAACTCTCTGCAAAAGGAGTGAGGATCTGGGATGCCAATGGGTCTC 105982 Query 34353 GAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCT 34412 | ||||| ||||| |||| || || | || | ||||| || |||||||| || || | Sbjct 105981 GGGACTTCCTGGATAAGCATGGCTTTACCTCCAGAGAGGAAGGAGACTTGGGACCAGTTT 105922 Query 34413 ACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 | || |||||||||||||| ||||| || || || Sbjct 105921 ATGGCTTCCAGTGGAGACATTTTGGTGCCGAATA 105888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447140881094880