Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq152076 105 6e-18
seq171586 96.9 3e-15
>seq152076
Length=2538501
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | || | || || ||| ||| || || || || || ||
Sbjct 778533 CATGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTC 778592
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| ||||| || | || |||||||| ||||| ||||| || || | |||||||||||
Sbjct 778593 GGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 778652
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
||| | || |||||||||| |||||| || | || | | || || || | |||
Sbjct 778653 GGGGATGCCCTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAATTGTGTCACTGGGCTC 778712
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || |||||||| || || || ||||| |||||
Sbjct 778713 TACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778763
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 39056 AGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG 39115
|||| || || | ||| | || | || || ||| ||| || || || || || ||||
Sbjct 778079 AGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGG 778138
Query 39116 CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGG 39175
||||| || | || |||||||| ||||| ||||| || || | ||||||||||| |
Sbjct 778139 AGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAG 778198
Query 39176 GCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCA 39235
| | || ||| |||||| |||||| || | || | | || || || | ||| |
Sbjct 778199 GGATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTA 778258
Query 39236 CGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| |||| ||||| | || |||||||| || || || ||||| |||||
Sbjct 778259 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778307
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | || | || || ||| ||| || || || || || ||
Sbjct 778305 CATGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTC 778364
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| ||||| || | || |||||||| ||||| ||||| || || | |||||||||||
Sbjct 778365 GGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 778424
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
|| | || ||| |||||| |||||| || | || | | || || || | |||
Sbjct 778425 AGGGATGCCCTCCTTGTCCTGGATTTTAGCCTTCACGTTCTCAATTGTGTCACTGGGCTC 778484
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 778485 TACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 778535
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | || | || || ||| ||| || || || || || ||
Sbjct 778761 CATGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTC 778820
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| ||||| || | || |||||||| ||||| ||||| || || | |||||||||||
Sbjct 778821 GGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 778880
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
|| | || ||| |||||| |||||| || | || | | || || || | |||
Sbjct 778881 AGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTC 778940
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 778941 TACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 778991
>seq171586
Length=8203
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | || | || || ||| ||| || || || || || ||
Sbjct 2196 CATGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTC 2255
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| ||||| || | || |||||||| ||||| ||||| || || | |||||||||||
Sbjct 2256 GGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 2315
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
|| | || ||| |||||| |||||| || | || | | || || || | |||
Sbjct 2316 AGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTC 2375
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || |||||||| || || || ||||| |||||
Sbjct 2376 TACCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2426
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113
|| ||| || || | ||| | || | || || ||| ||| || || || || || ||
Sbjct 1968 CATGCCACCCCTCAGGCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTC 2027
Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173
|| ||||| || | || |||||||| ||||| ||||| || || | |||||||||||
Sbjct 2028 GGAGAGTGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGG 2087
Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233
|| | || ||| |||||| |||||| || | || | | || || || | |||
Sbjct 2088 AGGGATGCCCTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTC 2147
Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| |||| ||||| | || || ||||| || || || ||||| |||||
Sbjct 2148 TACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 2198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428497776396602
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |