Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq152438 107 2e-18
seq1 104 2e-17
>seq152438
Length=1158950
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||| ||| || ||||| ||||| || |||||||| ||||| | ||| ||||| ||
Sbjct 125154 TCGTCTCGGCTTATGAGTTCATTAGAGAAAGTTAATCCAGGCATAAGACCCCTCTTCTTC 125095
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||||||||| || ||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 125094 AGCCAAAATATGGCAGCAAAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAGGCA 125035
Query 4692 AC 4693
||
Sbjct 125034 AC 125033
Score = 100 bits (110), Expect = 2e-16
Identities = 96/122 (79%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
||||||| ||| || ||||| ||||| || ||||||| ||||| | ||| ||||| ||
Sbjct 128082 TCGTCTCGGCTTATGAGTTCATTAGAGAAA-TTAATCCAGGCATAAGACCCCTCTTCTTC 128024
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||||||||| || ||||| || || || ||||| || ||||| || || ||||| ||
Sbjct 128023 AGCCAAAATATGGCAGCAAAGGATCCGGAGAAGAAGATTCCTTCCACAGCCGCAAAGGCA 127964
Query 4692 AC 4693
||
Sbjct 127963 AC 127962
Score = 82.4 bits (90), Expect = 7e-11
Identities = 94/125 (75%), Gaps = 1/125 (1%)
Strand=Plus/Minus
Query 4927 TTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGA 4985
||||| || || ||||| ||||| || || || || ||||||||||| ||||| | ||||
Sbjct 116454 TTTCTTACCAAATTTTCATTTACAATTCCATCGCTCGCTGCAAAAAATGCCAAGATATGA 116395
Query 4986 GATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045
|| ||||| || | || || | || || || |||||||| || | ||| || | |||
Sbjct 116394 GAGATAAAATATTTCTCCTCTGATTTCAGCTTGTTCCAGTGAGGAAGATCCTTTGATAAG 116335
Query 5046 TCAAC 5050
|||||
Sbjct 116334 TCAAC 116330
>seq1
Length=47594283
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|||||||| || || ||||| || ||||| || | || |||||||| ||||| || ||
Sbjct 29601952 TCGTCTCTACTGATGAGTTCATTGGAAAAAGTGAGCCCAGGCATTAACCCTCTTTTCTTG 29602011
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| || || ||||| || ||||| |||
Sbjct 29602012 AGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCCTCTACCGCTGCAAAGGCT 29602071
Query 4692 AC 4693
||
Sbjct 29602072 AC 29602073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426007865081282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |